RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 DMBX1Q8NFW5 382 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 PLEKHA2Q9HB19 425 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 PFDN1O60925 122 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 VDAC1P21796 283 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 IAH1Q2TAA2 248 aaPredicted RBP12.25□□□□□ -0.45
PRPF3-201ENST00000324862 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 CD300LFQ8TDQ1 290 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 PDCD10Q9BUL8 212 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
PRPF3-201ENST00000324862 LY6G6DO95868 133 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 OR2B8PP59922 312 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 SRPXP78539 464 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 HABP2Q14520 560 aaPredicted RBP12.25□□□□□ -0.45
PRPF3-201ENST00000324862 DEFB112Q30KQ8 113 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 C11orf87Q6NUJ2 197 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 AKAP14Q86UN6 197 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 PDPNQ86YL7 162 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 OR8H3Q8N146 312 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
PRPF3-201ENST00000324862 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
PRPF3-201ENST00000324862 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 FAM96BQ9Y3D0 163 aa12.25□□□□□ -0.45
PRPF3-201ENST00000324862 TXNL1O43396 289 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 B3GALNT1O75752 331 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 IGLV2-23P01705 113 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 SAA1P0DJI8 122 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-201ENST00000324862 NQO2P16083 231 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 OR4A47Q6IF82 309 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 RRNAD1Q96FB5 475 aaKnown RBP12.24□□□□□ -0.45
PRPF3-201ENST00000324862 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
PRPF3-201ENST00000324862 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
PRPF3-201ENST00000324862 SLC25A17O43808 307 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 P0C879 139 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 HLA-GP17693 338 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 MC5RP33032 325 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 KIR2DS2P43631 304 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 PJVKQ0ZLH3 352 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 GSG1LQ6UXU4 331 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 FOXRED2Q8IWF2 684 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 TCTEX1D1Q8N7M0 179 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 RANBP3Q9H6Z4 567 aaPredicted RBP12.23□□□□□ -0.45
PRPF3-201ENST00000324862 TMED3Q9Y3Q3 217 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 IFNA21P01568 189 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 OPN1MWP04001 364 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 OPN1MW2P0DN77 364 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 OPN1MW3P0DN78 364 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 CXorf66Q5JRM2 361 aaPredicted RBP12.23□□□□□ -0.45
PRPF3-201ENST00000324862 CCDC144NLQ6NUI1 221 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 TMEM219Q86XT9 240 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 ZNF48Q96MX3 618 aaPredicted RBP12.23□□□□□ -0.45
PRPF3-201ENST00000324862 SSX3Q99909 188 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 TNFRSF19Q9NS68 423 aa12.23□□□□□ -0.45
PRPF3-201ENST00000324862 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 G3V3Q6 166 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 CD1BP29016 333 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 H2BFWTQ7Z2G1 175 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 FAM212BQ9NTI7 297 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-201ENST00000324862 KCNAB3O43448 404 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 OR2A4O95047 310 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 TRAPPC2P0DI81 140 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 TRAPPC2BP0DI82 140 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 LY6EQ16553 131 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 OR2T35Q8NGX2 323 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 OSR1Q8TAX0 266 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-201ENST00000324862 OR2A7Q96R45 310 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 CLCC1Q96S66 551 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 MAGT1Q9H0U3 335 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
PRPF3-201ENST00000324862 FAM90A9PA6NNJ1 464 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 OOSP1A8MZH6 123 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 CD99P14209 185 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 MMDQ15546 238 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 DHRS7BQ6IAN0 325 aaPredicted RBP12.21□□□□□ -0.45
PRPF3-201ENST00000324862 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
PRPF3-201ENST00000324862 PPP1R1CQ8WVI7 109 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 FBXL15Q9H469 300 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 HIVEP2P31629 2446 aa12.21□□□□□ -0.45
PRPF3-201ENST00000324862 SH2D7A6NKC9 451 aaPredicted RBP12.21□□□□□ -0.46
PRPF3-201ENST00000324862 H3BUX3 64 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 PLXNB1O43157 2135 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 MOSP00540 346 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 FBP1P09467 338 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 RRASP10301 218 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 ERVK-16P61578 105 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 LSM10Q969L4 123 aaKnown RBP12.21□□□□□ -0.46
PRPF3-201ENST00000324862 C2orf50Q96LR7 162 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.46
PRPF3-201ENST00000324862 MEGF9Q9H1U4 602 aa12.21□□□□□ -0.46
PRPF3-201ENST00000324862 TNCP24821 2201 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms