RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SGPP2Q8IWX5 399 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 ADTRPQ96IZ2 230 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 ZMAT4Q9H898 229 aa9.39□□□□□ -0.91
TPM3-204ENST00000323144 TXNL4BQ9NX01 149 aaKnown RBP9.39□□□□□ -0.91
TPM3-204ENST00000323144 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
TPM3-204ENST00000323144 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 A0A1B0GW64 132 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 METTL21EPA6NDL7 271 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 BRI3O95415 125 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 RRASP10301 218 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 AADACP22760 399 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 EIF4EBP1Q13541 118 aaPredicted RBP9.38□□□□□ -0.91
TPM3-204ENST00000323144 RPEL1Q2QD12 228 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 HACD4Q5VWC8 232 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
TPM3-204ENST00000323144 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 ST6GALNAC5Q9BVH7 336 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 RNF167Q9H6Y7 350 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 DAPK2Q9UIK4 370 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 RAB26Q9ULW5 256 aa9.38□□□□□ -0.91
TPM3-204ENST00000323144 RBMX2Q9Y388 322 aaKnown RBP9.38□□□□□ -0.91
TPM3-204ENST00000323144 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 NOTOA8MTQ0 251 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 PPP5D1E7EU14 171 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 TUSC2O75896 110 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 OR2A4O95047 310 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 PTHLHP12272 177 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 MYOD1P15172 320 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 GALP22466 123 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 SFXN4Q6P4A7 337 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 SPARTQ8N0X7 666 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 TMEM68Q96MH6 324 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 CITED4Q96RK1 184 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 OR51E2Q9H255 320 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 TAS2R8Q9NYW2 309 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
TPM3-204ENST00000323144 OR2W1Q9Y3N9 320 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 SELENOKQ9Y6D0 94 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 S4R3C0 116 aa9.37□□□□□ -0.91
TPM3-204ENST00000323144 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 A8MZ25 164 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 E7EUB6 86 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 OR2J3O76001 311 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 KBTBD11O94819 623 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 HLA-AP01891 365 aaKnown RBP9.36□□□□□ -0.91
TPM3-204ENST00000323144 HLA-DQB1P01920 261 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 LYL1P12980 280 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 CD36P16671 472 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 RANBP1P43487 201 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 BRWD1-AS2P59051 145 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 GNG2P59768 71 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 MXD1Q05195 221 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 LCN12Q6JVE5 192 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 MMD2Q8IY49 270 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 OR5H6Q8NGV6 325 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 DCUN1D5Q9BTE7 237 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 PALMDQ9NP74 551 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 RHBDL2Q9NX52 303 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 SPATA2Q9UM82 520 aa9.36□□□□□ -0.91
TPM3-204ENST00000323144 MRPS7Q9Y2R9 242 aaKnown RBP9.36□□□□□ -0.91
TPM3-204ENST00000323144 TNFSF12O43508 249 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 ATP6V1G2O95670 118 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 FCER2P06734 321 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 AREGP15514 252 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
TPM3-204ENST00000323144 HAGHQ16775 308 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 C15orf32Q32M92 178 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 PUSL1Q8N0Z8 303 aaKnown RBP9.35□□□□□ -0.91
TPM3-204ENST00000323144 Q8N402 240 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 GVQW1Q8N7I0 195 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 ISOC1Q96CN7 298 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
TPM3-204ENST00000323144 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 LCE6AA0A183 80 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 CGB1A6NKQ9 187 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 ACTL6BO94805 426 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 REG1AP05451 166 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 IL6RP08887 468 aaPredicted RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 SDC2P34741 201 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 RPL27AP46776 148 aaKnown RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 CD81P60033 236 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms