RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR1N2Q8NGR9 330 aa6.09□□□□□ -1.44
SMC1A-201ENST00000322213 ATP6V0BQ99437 205 aa6.09□□□□□ -1.44
SMC1A-201ENST00000322213 CITED1Q99966 193 aa6.09□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A10PA6NDY2 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A18PA6NE21 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A16PA6NEW6 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A20PA6NIJ5 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A8PA6NJQ4 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A7PA6NKC0 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A22PA8MWA6 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A12PA8MX19 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A5PA8MXJ8 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A23PA8MXZ1 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 DHHO43323 396 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A15PP0C7V4 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A13PP0C7W8 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A14PP0C7W9 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FAM90A24PP0C7X0 464 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 GPR183P32249 361 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 RPL11P62913 178 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 INSM1Q01101 510 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 CDKN3Q16667 212 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM177Q53S58 311 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1W2PPV9 198 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 LILRA5A6NI73 299 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 H0Y8X5 98 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 LYL1P12980 280 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 CXorf66Q5JRM2 361 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 PRSS41Q7RTY9 318 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FOXQ1Q9C009 403 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 PLSCR2Q9NRY7 297 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 RPRMQ9NS64 109 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1W2PR80 420 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 PPIHO43447 177 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 TSPOP30536 169 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 CADM4Q8NFZ8 388 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 SLC25A33Q9BSK2 321 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 TMEM140Q9NV12 185 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 POLQO75417 2590 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 SRSF4Q08170 494 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 C5orf30Q96GV9 206 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FNDC4Q9H6D8 234 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 MT-CO3P00414 261 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 ORM2P19652 201 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 RPL31P62899 125 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 VN1R4Q7Z5H5 301 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 CLEC5AQ9NY25 188 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 METAP1P53582 386 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 UNC119Q13432 240 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 CEACAM16Q2WEN9 425 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 OR4X2Q8NGF9 303 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 C18orf12Q96KH6 178 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 MRPS16Q9Y3D3 137 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 C17orf99Q6UX52 265 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 G6PC2Q9NQR9 355 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 GPR3P46089 330 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 SPATA46Q5T0L3 261 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 FLYWCH2Q96CP2 140 aaKnown RBP6.08□□□□□ -1.44
SMC1A-201ENST00000322213 MPC1Q9Y5U8 109 aa6.08□□□□□ -1.44
SMC1A-201ENST00000322213 NAV2Q8IVL1 2488 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 DEFB108AA8MXU0 73 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PPIAL4DF5H284 164 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 CKS2P33552 79 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF137PP52743 207 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 SLC23A3Q6PIS1 610 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF418Q8TF45 676 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PGPEP1LA6NFU8 196 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 RBFOX2O43251 390 aaKnown RBP eCLIP6.07□□□□□ -1.441e-7■■■■■ 26.9
SMC1A-201ENST00000322213 CLDN14O95500 239 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 STPG3Q8N7X2 389 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF355PQ9NSJ1 428 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PRKNO60260 465 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 ZNF32P17041 273 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 VMA21Q3ZAQ7 101 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 VSTM2AQ8TAG5 236 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 PLPPR1Q8TBJ4 325 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 CD207Q9UJ71 328 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 IGKV1-8A0A0C4DH67 115 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 IL9P15248 144 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 MBD3L1Q8WWY6 194 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 GTSF1LQ9H1H1 148 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 CACNA1AO00555 2505 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 IGHV3-20A0A0C4DH32 117 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 CENPVL1A0A0U1RR11 272 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 A0A1B0GW15 77 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 KLRC4-KLRK1H3BQV0 150 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 K7N7A8 449 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 MGAT2Q10469 447 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 FOXL1Q12952 345 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 RASL11AQ6T310 242 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 YRDCQ86U90 279 aaKnown RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 SCCPDHQ8NBX0 429 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 H1FXQ92522 213 aaKnown RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
SMC1A-201ENST00000322213 NGBQ9NPG2 151 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 OR2T8A6NH00 312 aa6.07□□□□□ -1.44
SMC1A-201ENST00000322213 S100A4P26447 101 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms