RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PPIAL4FP0DN26 164 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 KCNMB1Q16558 191 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PRR31Q5SQ13 230 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PDPNQ86YL7 162 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 FAM131CQ96AQ9 280 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 SSBP3Q9BWW4 388 aaPredicted RBP13.97□□□□□ -0.17
CLIP4-201ENST00000320081 PPIAL4AQ9Y536 164 aa13.97□□□□□ -0.17
CLIP4-201ENST00000320081 IGHV3OR16-13A0A075B7E8 117 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 IGHV3-74A0A0B4J1X5 117 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 NEURL1O76050 574 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 HTR1DP28221 377 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 TFF3Q07654 80 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 OR51G1Q8NGK1 321 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 HS3ST6Q96QI5 342 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 TM2D1Q9BX74 207 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 CCL21O00585 134 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 LINC00869P0C866 280 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 ARL14EPLP0DKL9 152 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 SERF2P84101 59 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 HIST3H3Q16695 136 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 WDFY1Q8IWB7 410 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 OR8I2Q8N0Y5 310 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 PARLQ9H300 379 aa13.96□□□□□ -0.17
CLIP4-201ENST00000320081 PGPEP1LA6NFU8 196 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 RAMP3O60896 148 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 MUC15Q8N387 334 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 ZNF645Q8N7E2 425 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 DDA1Q9BW61 102 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 SEBOXQ9HB31 216 aaPredicted RBP13.96□□□□□ -0.18
CLIP4-201ENST00000320081 NPVFQ9HCQ7 196 aa13.96□□□□□ -0.18
CLIP4-201ENST00000320081 BMPR1BO00238 502 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 HPRT1P00492 218 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 COL8A1P27658 744 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 ACAA1P09110 424 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-201ENST00000320081 RPEL1Q2QD12 228 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 K7N7A8 449 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 GNG7O60262 68 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 TRGC1P0CF51 173 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 IGHV1-2P23083 117 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 S100A4P26447 101 aaKnown RBP13.95□□□□□ -0.18
CLIP4-201ENST00000320081 CRYBB3P26998 211 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 LHX2P50458 406 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 RND2P52198 227 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 HGFACQ04756 655 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 MANBALQ9NQG1 85 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 TMEM210A6NLX4 147 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 USF1P22415 310 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-201ENST00000320081 OTX1P32242 354 aaPredicted RBP13.95□□□□□ -0.18
CLIP4-201ENST00000320081 PTGDSP41222 190 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
CLIP4-201ENST00000320081 IER2Q9BTL4 223 aa13.95□□□□□ -0.18
CLIP4-201ENST00000320081 ARF6P62330 175 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 C9orf106Q8NAJ2 232 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 OR1L8Q8NGR8 309 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 WFDC1Q9HC57 220 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 TNCP24821 2201 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 LOC390937A0A1W2PQ73 354 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 SMPD2O60906 423 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 HTN1P15515 57 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 CLDN18P56856 261 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 Q0VFX4 171 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 PQLC2Q6ZP29 291 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 PRSS3P2Q8NHM4 247 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 GALNT14Q96FL9 552 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 CGB1A6NKQ9 187 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 RNF224P0DH78 156 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 CD81P60033 236 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 GCSAMLQ5JQS6 135 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 OR4F17Q8NGA8 305 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 FKBP11Q9NYL4 201 aa13.94□□□□□ -0.18
CLIP4-201ENST00000320081 P2RY6Q15077 328 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 C17orf82Q86X59 251 aaPredicted RBP13.93□□□□□ -0.18
CLIP4-201ENST00000320081 OR5AU1Q8NGC0 362 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 AAMDCQ9H7C9 122 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 COA4Q9NYJ1 87 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 HOXA6P31267 233 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 TNFSF10P50591 281 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 FOXF2Q12947 444 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 ACSF3Q4G176 576 aaPredicted RBP13.93□□□□□ -0.18
CLIP4-201ENST00000320081 Q6ZT83 130 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 DOLPP1Q86YN1 238 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 LINC01560Q8TB33 94 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 NABP1Q96AH0 204 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 FAM122AQ96E09 287 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
CLIP4-201ENST00000320081 C21orf62-AS1Q17RA5 79 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 FA2HQ7L5A8 372 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 LHFPL4Q7Z7J7 247 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 ADTRPQ96IZ2 230 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 RNF2Q99496 336 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 C1QTNF5Q9BXJ0 243 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 PKIBQ9C010 78 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 UBTD1Q9HAC8 227 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 GSN-AS1Q9NRJ2 163 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
CLIP4-201ENST00000320081 SLC17A3O00476 420 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms