RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 MRPL33O75394 65 aaKnown RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 OR2H2O95918 312 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 UNQ5815/PRO19632Q6UWF5 114 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 OR52L2PQ8NGH6 319 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 CCDC74BQ96LY2 380 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 QTRT1Q9BXR0 403 aaKnown RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 ZNF586Q9NXT0 402 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 IGHV3-43A0A0B4J1X8 118 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 ANKRD30BLA7E2S9 258 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 PMS2P5A8MQ11 134 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 C17orf112F2Z3M2 114 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 RRHO14718 337 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 CCL25O15444 150 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 NDUFB8O95169 186 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 IGHV3-43DP0DP04 118 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 HNRNPA3P51991 378 aaKnown RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 PSG7Q13046 419 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 PRR31Q5SQ13 230 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 MIC13Q5XKP0 118 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
PTPRA-202ENST00000318266 NAT8BQ9UHF3 227 aa8.09□□□□□ -1.11
PTPRA-202ENST00000318266 IGHV5-10-1A0A0J9YXX1 117 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 K7EN84 100 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CLDN14O95500 239 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 YPEL3P61236 119 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 RPL31P62899 125 aaKnown RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 HTD2P86397 168 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 FXYD3Q14802 87 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 TPRX1Q8N7U7 411 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 STRADBQ9C0K7 418 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CACNA1AO00555 2505 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 LRP5LA4QPB2 252 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CD99P14209 185 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CD1BP29016 333 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 B3GALT5-AS1P59052 145 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 FBXW9Q5XUX1 488 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 LCN12Q6JVE5 192 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 ST6GALNAC3Q8NDV1 305 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 APH1AQ96BI3 265 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 C5orf30Q96GV9 206 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 UHRF2Q96PU4 802 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 SIT1Q9Y3P8 196 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 IGHV1-45A0A0A0MS14 117 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 PIGBOS1A0A0B4J2F0 54 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 LAMTOR5O43504 91 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 IGHV3-13P01766 116 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 IGHV3-7P01780 117 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CRYABP02511 175 aaKnown RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 RAC2P15153 192 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 GDF1P27539 372 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 ATP6V1FQ16864 119 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 PDLIM3Q53GG5 364 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 COLCA1Q6ZS62 124 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-202ENST00000318266 SAXO1Q8IYX7 474 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 NRN1Q9NPD7 142 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 WDFY4Q6ZS81 3184 aa8.08□□□□□ -1.12
PTPRA-202ENST00000318266 HYPMO75409 117 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 P04436 131 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 OTX2P32243 289 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 SELENOTP62341 195 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 GNG3P63215 75 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
PTPRA-202ENST00000318266 MMD2Q8IY49 270 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 LAMTOR2Q9Y2Q5 125 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 FAM90A26D6RGX4 464 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 CDIPTO14735 213 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 ZNF253O75346 499 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 NXPH2O95156 264 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 GPX1P07203 203 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-202ENST00000318266 SPATA31B1PQ5VZV4 182 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 DOLPP1Q86YN1 238 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 TUSC5Q8IXB3 177 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 OR4B1Q8NGF8 309 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 TP73-AS1Q9UF72 201 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 RNF24Q9Y225 148 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 ACTL6BO94805 426 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 GRPP07492 148 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 COX6A1P12074 109 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
PTPRA-202ENST00000318266 Q6P435 159 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 C1orf174Q8IYL3 243 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 Q8N7P7 452 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 RNF2Q99496 336 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 RNASE7Q9H1E1 156 aaKnown RBP8.07□□□□□ -1.12
PTPRA-202ENST00000318266 IL36BQ9NZH7 164 aa8.07□□□□□ -1.12
PTPRA-202ENST00000318266 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
PTPRA-202ENST00000318266 RNF212BA8MTL3 300 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms