RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 VKORC1L1Q8N0U8 176 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 TAAR6Q96RI8 345 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 DCTN5Q9BTE1 182 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 ZDHHC11Q9H8X9 412 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 MRPS18CQ9Y3D5 142 aaKnown RBP8.83□□□□□ -1
COL3A1-202ENST00000317840 FRYQ5TBA9 3013 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 CACNA1AO00555 2505 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 MARCH11A6NNE9 402 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 CD1BP29016 333 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
COL3A1-202ENST00000317840 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 SAMD10Q9BYL1 202 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 WNK2Q9Y3S1 2297 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 PSG7Q13046 419 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 ZNF705AQ6ZN79 300 aaPredicted RBP8.83□□□□□ -1
COL3A1-202ENST00000317840 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
COL3A1-202ENST00000317840 FREM2Q5SZK8 3169 aa8.83□□□□□ -1
COL3A1-202ENST00000317840 SPINK4O60575 86 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 ATP5G3P48201 142 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
COL3A1-202ENST00000317840 IQCJQ1A5X6 159 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 TMEM14EPQ6UXP3 125 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 WFDC8Q8IUA0 241 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 TRBV6-6A0A0A6YYG2 114 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 DVL1O14640 695 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 ACTL6BO94805 426 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 THBS3P49746 956 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 SMIM21Q3B7S5 101 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 KLF14Q8TD94 323 aaPredicted RBP8.82□□□□□ -1
COL3A1-202ENST00000317840 BCL2L2Q92843 193 aaPredicted RBP8.82□□□□□ -1
COL3A1-202ENST00000317840 MS4A10Q96PG2 267 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 OPN3Q9H1Y3 402 aaPredicted RBP8.82□□□□□ -1
COL3A1-202ENST00000317840 SMPD2O60906 423 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 G0S2P27469 103 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 RAB31Q13636 194 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
COL3A1-202ENST00000317840 RNFT1Q5M7Z0 435 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 WDR86Q86TI4 376 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 BAGE3Q86Y29 109 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 BAGE2Q86Y30 109 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 ZBTB34Q8NCN2 500 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 HSPB7Q9UBY9 170 aa8.82□□□□□ -1
COL3A1-202ENST00000317840 PFN1P07737 140 aaKnown RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 GZMHP20718 246 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 NUBP1P53384 320 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 OR2Z1Q8NG97 314 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 LRRC29Q8WV35 223 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 INTS1Q8N201 2190 aaKnown RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 CLDN14O95500 239 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 SNRPCP09234 159 aaKnown RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 RPL29P47914 159 aaKnown RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 TNFSF10P50591 281 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 HTD2P86397 168 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 PAX5Q02548 391 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 MIC13Q5XKP0 118 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 PPP1R35Q8TAP8 253 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 S1PR3Q99500 378 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 DERL1Q9BUN8 251 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 TIMM9Q9Y5J7 89 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 A8MXE2 369 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
COL3A1-202ENST00000317840 GZMBP10144 247 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 MPV17P39210 176 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 ABHD12Q8N2K0 398 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 SERTAD4Q9NUC0 356 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 FKBP11Q9NYL4 201 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 WDFY3Q8IZQ1 3526 aa8.81□□□□□ -1
COL3A1-202ENST00000317840 TRGV8A0A0C4DH27 118 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 GRIFINA4D1Z8 144 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 SPRY3O43610 288 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 IGLV2-14P01704 120 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 C1QTNF9P0C862 333 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 NDUFB7P17568 137 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 SSTP61278 116 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
COL3A1-202ENST00000317840 VWA1Q6PCB0 445 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 OR13A1Q8NGR1 328 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 ACY3Q96HD9 319 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 ANKRD11Q6UB99 2663 aaPredicted RBP8.8□□□□□ -1
COL3A1-202ENST00000317840 PTPRQQ9UMZ3 2332 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 PRRG2O14669 202 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 TOMM20LQ6UXN7 152 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 GFRALQ6UXV0 394 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 UHRF2Q96PU4 802 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
COL3A1-202ENST00000317840 PDE6DO43924 150 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 ARL14EPLP0DKL9 152 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 ZNF718Q3SXZ3 478 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 RAB29O14966 203 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 TGIF2LYQ8IUE0 185 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 TGIF2LXQ8IUE1 241 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 ZNF664Q8N3J9 261 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 MISP3Q96FF7 219 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 CBLN4Q9NTU7 201 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 OR6C3Q9NZP0 311 aa8.8□□□□□ -1
COL3A1-202ENST00000317840 SPRR3Q9UBC9 169 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms