RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 RTL8AQ9BWD3 113 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 SPG11Q96JI7 2443 aa6.41□□□□□ -1.38
CDHR3-201ENST00000317716 TRBV24-1A0A075B6N3 115 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 IGKV1-27A0A075B6S5 117 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 HELTA6NFD8 242 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 NPIPB7O75200 414 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 TIAF1O95411 115 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 LINC00205P59089 165 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 MMD2Q8IY49 270 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 DNASE2BQ8WZ79 361 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 MCRIP2Q9BUT9 160 aaKnown RBP6.4□□□□□ -1.38
CDHR3-201ENST00000317716 LAMTOR2Q9Y2Q5 125 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 IGHV3-21A0A0B4J1V1 117 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 CD1BP29016 333 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 SRP14P37108 136 aaKnown RBP6.4□□□□□ -1.38
CDHR3-201ENST00000317716 RPL31P62899 125 aaKnown RBP6.4□□□□□ -1.38
CDHR3-201ENST00000317716 TCF15Q12870 199 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 GTF2H5Q6ZYL4 71 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 OR4B1Q8NGF8 309 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 OIT3Q8WWZ8 545 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 R3HDM4Q96D70 268 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 S1PR3Q99500 378 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 P2RX4Q99571 388 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 PXMP4Q9Y6I8 212 aa6.4□□□□□ -1.38
CDHR3-201ENST00000317716 DOPEY2Q9Y3R5 2298 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 DPRXA6NFQ7 191 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF891A8MT65 544 aaPredicted RBP6.4□□□□□ -1.39
CDHR3-201ENST00000317716 RRHO14718 337 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 APCSP02743 223 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 CYB561P49447 251 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 LHX2P50458 406 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 TM4SF20Q53R12 229 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 DCAF12Q5T6F0 453 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 GBGT1Q8N5D6 347 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 FAM89BQ8N5H3 189 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 LEAP2Q969E1 77 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 QTRT1Q9BXR0 403 aaKnown RBP6.4□□□□□ -1.39
CDHR3-201ENST00000317716 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM38BQ9NVV0 291 aa6.4□□□□□ -1.39
CDHR3-201ENST00000317716 TOX3O15405 576 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 RHBDL1O75783 438 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 NUDT3O95989 172 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 GATA2P23769 480 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 TSPAN7P41732 249 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 DSCR4P56555 118 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 PAFAH1B2P68402 229 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 NHLH1Q02575 133 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SCGB2A2Q13296 93 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 ZNF841Q6ZN19 808 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 TUSC5Q8IXB3 177 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM251Q8N6I4 163 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 C1orf147Q96MC9 270 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 HS3ST6Q96QI5 342 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 OR8B2Q96RD0 313 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 ATP23Q9Y6H3 246 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 PRR14LQ5THK1 2151 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 OR5B21A6NL26 309 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 PDE6DO43924 150 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 UCP1P25874 307 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 UBE2L3P68036 154 aaKnown RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 IGLV3-21P80748 117 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 C1orf194Q5T5A4 169 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SPINK14Q6IE38 97 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 VWA1Q6PCB0 445 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 Q6ZRM9 215 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 RABEPKQ7Z6M1 372 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SAP25Q8TEE9 199 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 TM2D1Q9BX74 207 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 NEURL1O76050 574 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 LYL1P12980 280 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 UCP2P55851 309 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 RHOBP62745 196 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 PMCHL1Q16048 86 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 LRRC75BQ2VPJ9 315 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 LYG1Q8N1E2 194 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 DRAM1Q8N682 238 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
CDHR3-201ENST00000317716 SLC45A2Q9UMX9 530 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 POLDIP2Q9Y2S7 368 aa6.39□□□□□ -1.39
CDHR3-201ENST00000317716 LYZL6O75951 148 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 TNFSF15O95150 251 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 ORM2P19652 201 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 CCL11P51671 97 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 ID3Q02535 119 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 PLGLAQ15195 96 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 EXT1Q16394 746 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FAM27BQ5VT28 67 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 OR5A2Q8NGI9 324 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 MRPL13Q9BYD1 178 aaKnown RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 SRXN1Q9BYN0 137 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 DLL3Q9NYJ7 618 aa6.38□□□□□ -1.39
CDHR3-201ENST00000317716 BOKQ9UMX3 212 aaPredicted RBP6.38□□□□□ -1.39
CDHR3-201ENST00000317716 FASNP49327 2511 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms