RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 DPRXA6NFQ7 191 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 F2RL2O00254 374 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 YPEL1O60688 119 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 HBE1P02100 147 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 NQO2P16083 231 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 MDKP21741 143 aaPredicted RBP12.16□□□□□ -0.46
CLK4-201ENST00000316308 RAB5BP61020 215 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 SERF2P84101 59 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 FFAR4Q5NUL3 377 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 DPPA3Q6W0C5 159 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 HEPN1Q6WQI6 88 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 IQCF2Q8IXL9 164 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 C12orf57Q99622 126 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 NIPSNAP3BQ9BS92 247 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 SLC39A9Q9NUM3 307 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 TRAV38-1A0A0B4J264 116 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 C5orf52A6NGY3 159 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 THBDP07204 575 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 TDGF1P3P51864 188 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 PAX5Q02548 391 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 NEUROG1Q92886 237 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 TVP23CQ96ET8 276 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
CLK4-201ENST00000316308 CHD8Q9HCK8 2581 aa12.16□□□□□ -0.46
CLK4-201ENST00000316308 SOX15O60248 233 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 RPS10P46783 165 aaKnown RBP12.15□□□□□ -0.46
CLK4-201ENST00000316308 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
CLK4-201ENST00000316308 RELBQ01201 579 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 CR1LQ2VPA4 569 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 STUMQ69YW2 141 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 LYG1Q8N1E2 194 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 ZNF383Q8NA42 475 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 EDARADDQ8WWZ3 215 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 RNF7Q9UBF6 113 aa12.15□□□□□ -0.46
CLK4-201ENST00000316308 OR8U8P0C7N1 319 aa12.15□□□□□ -0.47
CLK4-201ENST00000316308 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.47
CLK4-201ENST00000316308 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.47
CLK4-201ENST00000316308 DDB2Q92466 427 aa12.15□□□□□ -0.47
CLK4-201ENST00000316308 RAB24Q969Q5 203 aa12.15□□□□□ -0.47
CLK4-201ENST00000316308 FAM122AQ96E09 287 aa12.15□□□□□ -0.47
CLK4-201ENST00000316308 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 TMPRSS2O15393 492 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 HPRT1P00492 218 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 CRYABP02511 175 aaKnown RBP12.14□□□□□ -0.47
CLK4-201ENST00000316308 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 BSPH1Q075Z2 132 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 C1orf159Q96HA4 380 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
CLK4-201ENST00000316308 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
CLK4-201ENST00000316308 NAV3Q8IVL0 2385 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 PIGBOS1A0A0B4J2F0 54 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 IFNA10P01566 189 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 FOXC1Q12948 553 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 RNF212Q495C1 297 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 ZNF561Q8N587 486 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
CLK4-201ENST00000316308 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
CLK4-201ENST00000316308 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 GATA4P43694 442 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 RND1Q92730 232 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 S1PR3Q99500 378 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 COL6A6A6NMZ7 2263 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 GFRA3O60609 400 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 OR4A8P0C604 315 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 CCL3L1P16619 93 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 NBL1P41271 181 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 CENPVQ7Z7K6 275 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 TMEM204Q9BSN7 226 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
CLK4-201ENST00000316308 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
CLK4-201ENST00000316308 SRRM4A7MD48 611 aaKnown RBP12.12□□□□□ -0.47
CLK4-201ENST00000316308 DLX1P56177 255 aa12.12□□□□□ -0.47
CLK4-201ENST00000316308 KIAA0141Q14154 515 aaPredicted RBP12.12□□□□□ -0.47
CLK4-201ENST00000316308 MOB3BQ86TA1 216 aa12.12□□□□□ -0.47
CLK4-201ENST00000316308 OR51G1Q8NGK1 321 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms