RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ECSCRQ19T08 205 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 CLEC12BQ2HXU8 276 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 TMEM41BQ5BJD5 291 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 NECAP1Q8NC96 275 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 RSPO1Q2MKA7 263 aaPredicted RBP11.47□□□□□ -0.57
DDX54-202ENST00000314045 PRR27Q6MZM9 219 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 GINS3Q9BRX5 216 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 RSG1Q9BU20 258 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 LYRM2Q9NU23 88 aaPredicted RBP11.47□□□□□ -0.57
DDX54-202ENST00000314045 SELLP14151 372 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 USF1P22415 310 aaPredicted RBP11.47□□□□□ -0.57
DDX54-202ENST00000314045 FAM169BQ8N8A8 192 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 OR1B1Q8NGR6 318 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
DDX54-202ENST00000314045 MPTX1A8MV57 137 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 K7EM74 188 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 SLX1AQ9BQ83 275 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.57
DDX54-202ENST00000314045 KIAA1549LQ6ZVL6 1849 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 C1QL1O75973 258 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 FBP1P09467 338 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 OR4P4Q8NGL7 312 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 CHODLQ9H9P2 273 aa11.46□□□□□ -0.57
DDX54-202ENST00000314045 MLNRO43193 412 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 ZP3P21754 424 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 CEACAM8P31997 349 aaPredicted RBP11.46□□□□□ -0.58
DDX54-202ENST00000314045 UBE2L3P68036 154 aaKnown RBP11.46□□□□□ -0.58
DDX54-202ENST00000314045 OR4X1Q8NH49 305 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 SSBP3Q9BWW4 388 aaPredicted RBP11.46□□□□□ -0.58
DDX54-202ENST00000314045 NMBP08949 121 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 SERF2P84101 59 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 ZNF90Q03938 601 aa11.46□□□□□ -0.58
DDX54-202ENST00000314045 LCN2P80188 198 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 KIAA0141Q14154 515 aaPredicted RBP11.45□□□□□ -0.58
DDX54-202ENST00000314045 IGFL2Q6UWQ7 119 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 RTN4RL2Q86UN3 420 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 PERPQ96FX8 193 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 NDFIP1Q9BT67 221 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 FAM215AQ9Y5M1 114 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 MUC22E2RYF6 1773 aaPredicted RBP11.45□□□□□ -0.58
DDX54-202ENST00000314045 PFDN5Q99471 154 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 RNF2Q99496 336 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 DPM3Q9P2X0 92 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 ZNF503-AS2A6NEH8 195 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 SIGLEC5O15389 551 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 FAM222BQ8WU58 562 aa11.45□□□□□ -0.58
DDX54-202ENST00000314045 MPZP25189 248 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 PRR14LQ5THK1 2151 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 ZNF581Q9P0T4 197 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 TMEM218A2RU14 115 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 LINC00862A6NCI5 91 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 YPEL1O60688 119 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 NAPSAO96009 420 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SLC25A5P05141 298 aaKnown RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 ACAA1P09110 424 aaPredicted RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 ZNF250P15622 560 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SULT1A2P50226 295 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 PSG5Q15238 335 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SLC35E3Q7Z769 313 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 Q8WTZ3 238 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 YPEL2Q96QA6 119 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SAMD10Q9BYL1 202 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 OR10J1P30954 320 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 ADIPOQQ15848 244 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 ZNF672Q499Z4 452 aaPredicted RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 FAM168AQ92567 244 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SMIM8Q96KF7 97 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 CEACAM18A8MTB9 384 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 SPP1P10451 314 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 HABP2Q14520 560 aaPredicted RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 TMEM241Q24JQ0 296 aa11.44□□□□□ -0.58
DDX54-202ENST00000314045 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX54-202ENST00000314045 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
DDX54-202ENST00000314045 MORN2Q502X0 79 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 LHFPL1Q86WI0 220 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 THBDP07204 575 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 ANGPTL6Q8NI99 470 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 OSR1Q8TAX0 266 aaPredicted RBP11.43□□□□□ -0.58
DDX54-202ENST00000314045 NUP37Q8NFH4 326 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
DDX54-202ENST00000314045 NCOA6Q14686 2063 aaPredicted RBP11.43□□□□□ -0.58
DDX54-202ENST00000314045 PCNTO95613 3336 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms