RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
TUBA3E-201ENST00000312988 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
TUBA3E-201ENST00000312988 M0QZK8 103 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 RRHO14718 337 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 SPDEFO95238 335 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 SFT2D2O95562 160 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 OR4E1P0C645 316 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 RPA2P15927 270 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 NQO2P16083 231 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 SUPT4H1P63272 117 aaKnown RBP12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 PSG5Q15238 335 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 DMBX1Q8NFW5 382 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 R3HDM4Q96D70 268 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 GALNT14Q96FL9 552 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 METTL1Q9UBP6 276 aaKnown RBP12.53□□□□□ -0.4
TUBA3E-201ENST00000312988 FAM181BA6NEQ2 426 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 SRRM4A7MD48 611 aaKnown RBP12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 INMT-MINDY4F8WBC2 141 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 KRASP01116 189 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 UCP1P25874 307 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 NPBQ8NG41 125 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 RHOVQ96L33 236 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 NPFFR1Q9GZQ6 430 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 PLSCR3Q9NRY6 295 aa12.52□□□□□ -0.4
TUBA3E-201ENST00000312988 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 C9orf170A2RU37 121 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 SH2D7A6NKC9 451 aaPredicted RBP12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 FGF16O43320 207 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 ATG12O94817 140 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 NDUFA3O95167 84 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 IGLV2-23P01705 113 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 SAA1P0DJI8 122 aaPredicted RBP12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 G6PCP35575 357 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 AKR1C2P52895 323 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 UBE2KP61086 200 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 SRPXP78539 464 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 TMEM187Q14656 261 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 C5orf64Q2M2E5 130 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 TMEM268Q5VZI3 342 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 Q8N9W7 124 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 CLCC1Q96S66 551 aa12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 ALX4Q9H161 411 aaPredicted RBP12.52□□□□□ -0.41
TUBA3E-201ENST00000312988 SETD2Q9BYW2 2564 aaPredicted RBP12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 DHRS2Q13268 280 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 ARSJQ5FYB0 599 aaPredicted RBP12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 LGI3Q8N145 548 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 OR52B4Q8NGK2 314 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
TUBA3E-201ENST00000312988 OR2A4O95047 310 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 CDS2O95674 445 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 DHFRP00374 187 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 LIN54Q6MZP7 749 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 H2BFWTQ7Z2G1 175 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 FAM71E2Q8N5Q1 922 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 TEX45Q8NA69 505 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 ZFAND2BQ8WV99 257 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 OR2A7Q96R45 310 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 MARVELD1Q9BSK0 173 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 GPN1Q9HCN4 374 aaPredicted RBP12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 TPSG1Q9NRR2 321 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 SIGLEC9Q9Y336 463 aa12.5□□□□□ -0.41
TUBA3E-201ENST00000312988 MECP2P51608 486 aaKnown RBP12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 RAG2P55895 527 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 RPL15P61313 204 aaKnown RBP12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 GNB1P62873 340 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 BLCAPP62952 87 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 ANKRD55Q3KP44 614 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 TMEM56Q96MV1 263 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 PRSS22Q9GZN4 317 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 RANBP3Q9H6Z4 567 aaPredicted RBP12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 TMEM56-RWDD3S4R434 201 aa12.49□□□□□ -0.41
TUBA3E-201ENST00000312988 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 PRAF2O60831 178 aa12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 KBTBD11O94819 623 aa12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 AMY1AP04745 511 aa12.48□□□□□ -0.41
TUBA3E-201ENST00000312988 IL5P05113 134 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms