RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SCCPDHQ8NBX0 429 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF714Q96N38 554 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 ORM2P19652 201 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 ASIPP42127 132 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 OR1N2Q8NGR9 330 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 MUC4Q99102 2169 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 GAGE10A6NGK3 116 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 MEOX1P50221 254 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 WIPI1Q5MNZ9 446 aaPredicted RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 Q6ZT83 130 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 CCL4L1Q8NHW4 92 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 PARLQ9H300 379 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 RBPMS2Q6ZRY4 209 aaKnown RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 RCC1LQ96I51 464 aaKnown RBP7.57□□□□□ -1.2
COL6A5-202ENST00000312481 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
COL6A5-202ENST00000312481 CRYBA2P53672 197 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 LYPD1Q8N2G4 141 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 DNAJA3Q96EY1 480 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 MRPL13Q9BYD1 178 aaKnown RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 NPIPB6E9PJ23 425 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 RHOGP84095 191 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 HEPN1Q6WQI6 88 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 METTL26Q96S19 204 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 PCGF1Q9BSM1 259 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 COL4A4P53420 1690 aaPredicted RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 IGHV5-10-1A0A0J9YXX1 117 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 H3BP45 60 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 YPEL1O60688 119 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 WNT2P09544 360 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 GPR6P46095 362 aaPredicted RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 C10orf91Q5T1B1 145 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 DCAF12L2Q5VW00 463 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 AMER3Q8N944 861 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 WDYHV1Q96HA8 205 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 YPEL2Q96QA6 119 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 OVOL2Q9BRP0 275 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 MIEN1Q9BRT3 115 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 IGKV3D-15A0A087WSY6 115 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF716A6NP11 495 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 GLRXP35754 106 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 KIR2DL2P43627 348 aaPredicted RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 FGFRL1Q8N441 504 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 OR11H4Q8NGC9 324 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 NUDT8Q8WV74 236 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 OR5P3Q8WZ94 311 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 NEURL1O76050 574 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 CCL20P78556 96 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 PARP12Q9H0J9 701 aaKnown RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 PAX1P15863 534 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 DEFB119Q8N690 84 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
COL6A5-202ENST00000312481 IGHV1-45A0A0A0MS14 117 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 A0A1W2PQF6 199 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF785A8K8V0 405 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 F2Z2F3 143 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 SLC17A3O00476 420 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 LINC00696Q6ZRV3 163 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 GUCD1Q96NT3 240 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 RARRES2Q99969 163 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 INSIG2Q9Y5U4 225 aa7.56□□□□□ -1.2
COL6A5-202ENST00000312481 TRGV8A0A0C4DH27 118 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 BTCP35070 178 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 DOK4Q8TEW6 326 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 BLNKQ8WV28 456 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 C18orf12Q96KH6 178 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 TNFRSF19Q9NS68 423 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 PAGE4O60829 102 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 CD3EP07766 207 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 PMP22Q01453 160 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 INSL4Q14641 139 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 SPATA45Q537H7 98 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 SLC25A48Q6ZT89 311 aaKnown RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 NPCDR1Q9BY65 106 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 GPR61Q9BZJ8 451 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 LDLRAD4O15165 306 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 RPL31P62899 125 aaKnown RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 OR4P4Q8NGL7 312 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
COL6A5-202ENST00000312481 SLC35B1P78383 322 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 OR8I2Q8N0Y5 310 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 DYRK2Q92630 601 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 CCL28Q9NRJ3 127 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
COL6A5-202ENST00000312481 PIN1P1O15428 100 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms