RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
CLCF1-201ENST00000312438 PCGF1Q9BSM1 259 aa13.62□□□□□ -0.23
CLCF1-201ENST00000312438 DFFBO76075 338 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 IGLV1-47P01700 117 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 PDLIM3Q53GG5 364 aaPredicted RBP13.61□□□□□ -0.23
CLCF1-201ENST00000312438 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 TGIF2LXQ8IUE1 241 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 LHX4Q969G2 390 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 NABP2Q9BQ15 211 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 ONECUT1Q9UBC0 465 aa13.61□□□□□ -0.23
CLCF1-201ENST00000312438 USF3Q68DE3 2245 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 H7C2Y5 167 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 M0R1W7 72 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 METTL15P1P0C7V9 234 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 SPP1P10451 314 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 MC5RP33032 325 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 REG1BP48304 166 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 OR2B8PP59922 312 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 HBG1P69891 147 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 HBG2P69892 147 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 TMEM267Q0VDI3 215 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 HLA-DRB5Q30154 266 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 TMEM14EPQ6UXP3 125 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 FLYWCH2Q96CP2 140 aaKnown RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 ATP5SQ99766 215 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 IL6RP08887 468 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 SULT1A2P50226 295 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 ARF6P62330 175 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 TMEM177Q53S58 311 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 PDPNQ86YL7 162 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 STPG2Q8N412 459 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 ZNF525Q8N782 197 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 SAT2Q96F10 170 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 TSNAXQ99598 290 aaKnown RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 CCL19Q99731 98 aa13.6□□□□□ -0.23
CLCF1-201ENST00000312438 BARX1Q9HBU1 254 aaPredicted RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 STRAPQ9Y3F4 350 aaKnown RBP13.6□□□□□ -0.23
CLCF1-201ENST00000312438 SRRM4A7MD48 611 aaKnown RBP13.59□□□□□ -0.23
CLCF1-201ENST00000312438 BUB1B-PAK6H3BSN5 160 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 SHOXO15266 292 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 C1orf122Q6ZSJ8 110 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 Q8N7P7 452 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 HSD17B11Q8NBQ5 300 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 OR4C13Q8NGP0 309 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 CLCC1Q96S66 551 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 NUP50Q9UKX7 468 aa13.59□□□□□ -0.23
CLCF1-201ENST00000312438 C15orf61A6NNL5 157 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 ZNF705EA8MWA4 302 aaPredicted RBP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 IGHV2-5P01817 119 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 IGHV4-39P01824 125 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 PDLIM4P50479 330 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 RAB13P51153 203 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 RPP30P78346 268 aaKnown RBP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 SRSF1Q07955 248 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 MARVELD3Q96A59 401 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 PRNDQ9UKY0 176 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 FOXA2Q9Y261 457 aaPredicted RBP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 WASHC3Q9Y3C0 194 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 AMMECR1Q9Y4X0 333 aaPredicted RBP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 MALRD1Q5VYJ5 2156 aa13.58□□□□□ -0.24
CLCF1-201ENST00000312438 YLPM1P49750 1951 aaKnown RBP13.58□□□□□ -0.24
CLCF1-201ENST00000312438 UPK2O00526 184 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 IFNA5P01569 189 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 DLX1P56177 255 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 HSPE1P61604 102 aaKnown RBP13.57□□□□□ -0.24
CLCF1-201ENST00000312438 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 GNPNAT1Q96EK6 184 aaPredicted RBP13.57□□□□□ -0.24
CLCF1-201ENST00000312438 REG4Q9BYZ8 158 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 BPESC1Q9GZL8 116 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 BET1LQ9NYM9 111 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 PLA2G2EQ9NZK7 142 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 MFSD2BA6NFX1 497 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 PRTN3P24158 256 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 COX7A1P24310 79 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 RAB5CP51148 216 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 BLOC1S1P78537 153 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 SPINK9Q5DT21 86 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 PNKDQ8N490 385 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 OR11H6Q8NGC7 330 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 OR4C12Q96R67 309 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
CLCF1-201ENST00000312438 ENSAO43768 121 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 SCAF4O95104 1147 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
CLCF1-201ENST00000312438 AANATQ16613 207 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 ATP6V1FQ16864 119 aa13.56□□□□□ -0.24
CLCF1-201ENST00000312438 SP5Q6BEB4 398 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms