RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 OR4C45A6NMZ5 311 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 ITLN1Q8WWA0 313 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM160Q9NX00 188 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 NTN1O95631 604 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 C7orf69Q9H7B7 122 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 HLA-DQA1P01909 254 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 CGB7P0DN87 165 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 ABHD12Q8N2K0 398 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 SEMA5BQ9P283 1151 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 C7orf66A4D0T2 115 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 CD8AP01732 235 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 DUSP15Q9H1R2 295 aaPredicted RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 EIF3GO75821 320 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 BGLAPP02818 100 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
SPTBN2-201ENST00000309996 CKS1BP61024 79 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 P2RY6Q15077 328 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 C3orf36Q3SXR2 165 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 DNM1P46Q6ZS02 220 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 CLEC7AQ9BXN2 247 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 TLNRD1Q9H1K6 362 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM74BQ9NUR3 256 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 PKD1L3Q7Z443 1732 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 FXYD3Q14802 87 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 M0R381 172 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 HMGA2P52926 109 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 LOC102723996A0A087X1L8 192 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 H0Y980 276 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 SRSF12Q8WXF0 261 aaKnown RBP11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM45BQ96B21 275 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 RBKSQ9H477 322 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
SPTBN2-201ENST00000309996 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 ZNF345Q14585 488 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 CLPPQ16740 277 aaPredicted RBP11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 SLC25A34Q6PIV7 304 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 TPRX1Q8N7U7 411 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 WDR34Q96EX3 536 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 TNFSF18Q9UNG2 199 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 TMEM106BQ9NUM4 274 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 PNKDQ8N490 385 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 CEP290O15078 2479 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 CFDP00746 253 aaPredicted RBP11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 ARL14EPLP0DKL9 152 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 GCSAMQ8N6F7 178 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 NRIP2Q9BQI9 281 aa11.09□□□□□ -0.63
SPTBN2-201ENST00000309996 F8WEM9 126 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 COL9A1P20849 921 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 DRD3P35462 400 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 FAM219BQ5XKK7 198 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 MARS2Q96GW9 593 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 IDI2-AS1Q9NZ38 188 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 LNP1A1A4G5 178 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 CEACAM21Q3KPI0 293 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 NRXN3Q9Y4C0 1643 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 C1QTNF9BB2RNN3 333 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 FAM214BQ7L5A3 538 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 FAM169BQ8N8A8 192 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 COX14Q96I36 57 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 KIAA0040Q15053 153 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 PARLQ9H300 379 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 DNAJC4Q9NNZ3 241 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 DSPPQ9NZW4 1301 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 SELENOHQ8IZQ5 122 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 IGHV3OR16-13A0A075B7E8 117 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 IGHV3-74A0A0B4J1X5 117 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 CISD3P0C7P0 127 aa11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.64
SPTBN2-201ENST00000309996 TRGC2P03986 189 aa11.07□□□□□ -0.64
SPTBN2-201ENST00000309996 OR10S1Q8NGN2 331 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms