RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 COL11A1P12107 1806 aaPredicted RBP10.83□□□□□ -0.68
USP38-201ENST00000307017 HOXA3O43365 443 aaPredicted RBP10.83□□□□□ -0.68
USP38-201ENST00000307017 ATP5G3P48201 142 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 DMRTC2Q8IXT2 367 aaPredicted RBP10.83□□□□□ -0.68
USP38-201ENST00000307017 PRF1P14222 555 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 TMEM211Q6ICI0 200 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 LINC01560Q8TB33 94 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 MPDU1O75352 247 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 TMPRSS3P57727 454 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 LCN2P80188 198 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 ZP4Q12836 540 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 TMEM74BQ9NUR3 256 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 DCTN5Q9BTE1 182 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 UQCR10Q9UDW1 63 aa10.83□□□□□ -0.68
USP38-201ENST00000307017 DSPPQ9NZW4 1301 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 LINC00614P0C842 121 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 TBX21Q9UL17 535 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 HEATR5BQ9P2D3 2071 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 H1FOOQ8IZA3 346 aaPredicted RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 TGFBR3LH3BV60 316 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 NPFFO15130 113 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 IL4P05112 153 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 FAM71F2Q6NXP2 309 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 GSN-AS1Q9NRJ2 163 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 PGPEP1LA6NFU8 196 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 FOLR2P14207 255 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 ICAM4Q14773 271 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 C1QL2Q7Z5L3 287 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 SPSB4Q96A44 273 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 OR51M1Q9H341 326 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 A0A1B0GWB2 263 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 APOHP02749 345 aaPredicted RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 RAG2P55895 527 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 J3QT63 122 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 FOXS1O43638 330 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 SLC25A38Q96DW6 304 aa10.82□□□□□ -0.68
USP38-201ENST00000307017 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
USP38-201ENST00000307017 UNC13CQ8NB66 2214 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 C8orf82Q6P1X6 216 aaPredicted RBP10.81□□□□□ -0.68
USP38-201ENST00000307017 ITLN2Q8WWU7 325 aaPredicted RBP10.81□□□□□ -0.68
USP38-201ENST00000307017 PLXNB2O15031 1838 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 DERL1Q9BUN8 251 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 MSGN1A6NI15 193 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 HPRT1P00492 218 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 GZMMP51124 257 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 WDR82Q6UXN9 313 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 STPG3Q8N7X2 389 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 GALP22466 123 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 A8MWL6 223 aa10.81□□□□□ -0.68
USP38-201ENST00000307017 TUBGCP6Q96RT7 1819 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
USP38-201ENST00000307017 TNFSF14O43557 240 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 CD55P08174 381 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 COX6CP09669 75 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 GZMHP20718 246 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 FOXA2Q9Y261 457 aaPredicted RBP10.8□□□□□ -0.68
USP38-201ENST00000307017 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 H3BUT2 72 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 FBXW9Q5XUX1 488 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 TMEM101Q96IK0 257 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
USP38-201ENST00000307017 IGFBP2P18065 325 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 CEACAM21Q3KPI0 293 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 DEGS2Q6QHC5 323 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 BEND2Q8NDZ0 799 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 DDB2Q92466 427 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 JMJD8Q96S16 334 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 FER1L5A0AVI2 2057 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 A6NJY4 79 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 LSM6P62312 80 aaKnown RBP10.8□□□□□ -0.68
USP38-201ENST00000307017 PNKDQ8N490 385 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 TRAV21A0A0B4J279 112 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 C7orf66A4D0T2 115 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 DNASE2BQ8WZ79 361 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 PPP1R3EQ9H7J1 279 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 MPDZO75970 2070 aa10.8□□□□□ -0.68
USP38-201ENST00000307017 CASP8AP2Q9UKL3 1982 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 LAMB2P55268 1798 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 DPRXA6NFQ7 191 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 C16orf97H3BN30 126 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 ADMP35318 185 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 TMEM222Q9H0R3 208 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 COL22A1Q8NFW1 1626 aaPredicted RBP10.79□□□□□ -0.68
USP38-201ENST00000307017 ANKRD36A6QL64 1941 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 PRB1P04280 392 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 MMD2Q8IY49 270 aa10.79□□□□□ -0.68
USP38-201ENST00000307017 DLL3Q9NYJ7 618 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms