RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 VAMP2P63027 116 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 HCP5Q6MZN7 132 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 OR4C13Q8NGP0 309 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 FLYWCH2Q96CP2 140 aaKnown RBP14.21□□□□□ -0.13
KRT28-201ENST00000306658 MBD6Q96DN6 1003 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 MAGT1Q9H0U3 335 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 CACFD1Q9UGQ2 172 aa14.21□□□□□ -0.13
KRT28-201ENST00000306658 ODF3BA8MYP8 253 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 LY6LH3BQJ8 138 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 SHOXO15266 292 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 KCNAB3O43448 404 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 SSSCA1O60232 199 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 RPL12P30050 165 aaKnown RBP14.2□□□□□ -0.14
KRT28-201ENST00000306658 KLRD1Q13241 179 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 POU2AF1Q16633 256 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 VKORC1L1Q8N0U8 176 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 OR4A16Q8NH70 328 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 RAB40CQ96S21 281 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 ZC4H2Q9NQZ6 224 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 TMEM140Q9NV12 185 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 IGHV1-3A0A0C4DH29 117 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 KANTRA0A1W2PQU2 76 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 RNASEK-C17orf49H0YIS7 233 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 SYNGR2O43760 224 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 CHST1O43916 411 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 MED6O75586 246 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 HOXB4P17483 251 aaPredicted RBP14.2□□□□□ -0.14
KRT28-201ENST00000306658 IFITM2Q01629 132 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 TMEM177Q53S58 311 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
KRT28-201ENST00000306658 HKR1P10072 659 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 LGALS4P56470 323 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 PAX8Q06710 450 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 HIST2H2BCQ6DN03 193 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 MOB3BQ86TA1 216 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 HARBI1Q96MB7 349 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 TBX15Q96SF7 602 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
KRT28-201ENST00000306658 MSGN1A6NI15 193 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 B4DSR2 109 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 GPR137BO60478 399 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 MSMBP08118 114 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 OR9G9P0C7N8 305 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 UBE2E1P51965 193 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 UBE2KP61086 200 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 RPS16P62249 146 aaKnown RBP14.18□□□□□ -0.14
KRT28-201ENST00000306658 MINOS1Q5TGZ0 78 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 OR4A47Q6IF82 309 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 C11orf1Q9H5F2 150 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 MINOS1-NBL1R4GNA1 71 aa14.18□□□□□ -0.14
KRT28-201ENST00000306658 BCL2L11O43521 198 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 CAV2P51636 162 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 RPL23AP62750 156 aaKnown RBP14.17□□□□□ -0.14
KRT28-201ENST00000306658 AARDQ4LEZ3 155 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 PDZD9Q8IXQ8 264 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 OR8H3Q8N146 312 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 OR2C3Q8N628 320 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 ARPC5LQ9BPX5 153 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 MS4A7Q9GZW8 240 aaPredicted RBP14.17□□□□□ -0.14
KRT28-201ENST00000306658 SLC25A31Q9H0C2 315 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 LYRM2Q9NU23 88 aaPredicted RBP14.17□□□□□ -0.14
KRT28-201ENST00000306658 WSB1Q9Y6I7 421 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 GCN1Q92616 2671 aaKnown RBP14.17□□□□□ -0.14
KRT28-201ENST00000306658 APCP25054 2843 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 LGALS7P47929 136 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 RELBQ01201 579 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 Q5PR19 223 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 PRSS57Q6UWY2 283 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 SLC51BQ86UW2 128 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 BET1LQ9NYM9 111 aa14.17□□□□□ -0.14
KRT28-201ENST00000306658 TBL2Q9Y4P3 447 aaKnown RBP14.17□□□□□ -0.14
KRT28-201ENST00000306658 ABCA2Q9BZC7 2435 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 A0A1W2PRD5 423 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 A0A1W2PRF3 423 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 A0A1W2PRM7 423 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 SRRM4A7MD48 611 aaKnown RBP14.16□□□□□ -0.14
KRT28-201ENST00000306658 OOSP1A8MZH6 123 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 TAAR5O14804 337 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 IFNA17P01571 189 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 TAS2R30P59541 319 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 CCDC144NLQ6NUI1 221 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 ZNF429Q86V71 674 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 OR8H1Q8NGG4 311 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 OR52E5Q8NH55 327 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 VSTM2AQ8TAG5 236 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 C1orf159Q96HA4 380 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 SMIM8Q96KF7 97 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 QTRT1Q9BXR0 403 aaKnown RBP14.16□□□□□ -0.14
KRT28-201ENST00000306658 RBKSQ9H477 322 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 HILPDAQ9Y5L2 63 aa14.16□□□□□ -0.14
KRT28-201ENST00000306658 MAP1AP78559 2803 aaPredicted RBP14.16□□□□□ -0.14
KRT28-201ENST00000306658 IGHV3-72A0A0B4J1Y9 119 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 A0A1W2PPI3 338 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 C15orf61A6NNL5 157 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 RGS13O14921 159 aa14.15□□□□□ -0.14
KRT28-201ENST00000306658 IL6RP08887 468 aaPredicted RBP14.15□□□□□ -0.14
KRT28-201ENST00000306658 GATA3P23771 443 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms