RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CX3CL1P78423 397 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TMEM267Q0VDI3 215 aaPredicted RBP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF79Q15937 498 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TEX38Q6PEX7 206 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 IDO2Q6ZQW0 420 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF329Q86UD4 541 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LHFPL1Q86WI0 220 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TCTEX1D1Q8N7M0 179 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CCDC71LQ8N9Z2 235 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TEX45Q8NA69 505 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR4D10Q8NGI6 311 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR4C16Q8NGL9 310 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZFAND1Q8TCF1 268 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ARPC1AQ92747 370 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF486Q96H40 463 aaPredicted RBP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PHB2Q99623 299 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PRRT1Q99946 306 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TPSG1Q9NRR2 321 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SCP2D1Q9UJQ7 156 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF580Q9UK33 172 aa8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 C14orf166Q9Y224 244 aaKnown RBP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TSSC4Q9Y5U2 329 aaPredicted RBP8.67□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TRAV41A0A0B4J266 112 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 A6NHS1 94 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RAMP3O60896 148 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PGLYRP1O75594 196 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 NQO2P16083 231 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TAS2R31P59538 309 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 NDPQ00604 133 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FXYD3Q14802 87 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TNXAQ16473 311 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CXorf66Q5JRM2 361 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF57Q68EA5 555 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 ZNF562Q6V9R5 426 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TBC1D26Q86UD7 250 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MMD2Q8IY49 270 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GRPEL2Q8TAA5 225 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SLC2A9Q9NRM0 540 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 COMMD9Q9P000 198 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 COPZ2Q9P299 210 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 WSB1Q9Y6I7 421 aa8.66□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 A0A1W2PN81 502 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 A0A1W2PRX2 142 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FCN1O00602 326 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MPPED1O15442 326 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 KBTBD11O94819 623 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR2A4O95047 310 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 S1PR2O95136 353 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CRYGBP07316 175 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PF4V1P10720 104 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 F2RP25116 425 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CD40LGP29965 261 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CHRNA7P36544 502 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PIGPP57054 158 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 CNPY1Q3B7I2 92 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 TMEM65Q6PI78 240 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 UNQ5815/PRO19632Q6UWF5 114 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 VKORC1L1Q8N0U8 176 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 GDPD1Q8N9F7 314 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR51S1Q8NGJ8 323 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 DEDD2Q8WXF8 326 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 RHOVQ96L33 236 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SCGB3A2Q96PL1 93 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 OR2A7Q96R45 310 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 FAM103A1Q9BTL3 118 aaKnown RBP8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 SRRQ9GZT4 340 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 PLEKHA2Q9HB19 425 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 HRASLSQ9HDD0 168 aa8.65□□□□□ -1.02
CSPG4P1Y-201ENST00000306641 STAB1Q9NY15 2570 aa8.65□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 TNCP24821 2201 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 NUDT19A8MXV4 375 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 G3V318 75 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ELANEP08246 267 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF735P0CB33 412 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PI3P19957 117 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CRIP2P52943 208 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 RND3P61587 244 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 CD83Q01151 205 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 ZNF45Q02386 682 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 FOXE3Q13461 319 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 SURF2Q15527 256 aaPredicted RBP8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 PRSS8Q16651 343 aa8.64□□□□□ -1.03
CSPG4P1Y-201ENST00000306641 OR4F17Q8NGA8 305 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms