RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
SRGAP2C-201ENST00000304465 OR2A7Q96R45 310 aa12.85□□□□□ -0.35
SRGAP2C-201ENST00000304465 TMEM222Q9H0R3 208 aa12.85□□□□□ -0.35
SRGAP2C-201ENST00000304465 H0Y980 276 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 SIX6O95475 246 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 UCP1P25874 307 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 RAB7AP51149 207 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 LINC00205P59089 165 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 ZNF436Q9C0F3 470 aaPredicted RBP12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 KCNIP3Q9Y2W7 256 aa12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
SRGAP2C-201ENST00000304465 G3V3Q6 166 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 GOSR2O14653 212 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 ADAP1O75689 374 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 GNG10P50151 68 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF585BQ52M93 769 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 RPL39P5Q59GN2 51 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 OR9G1Q8NH87 305 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 COQ8AQ8NI60 647 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
SRGAP2C-201ENST00000304465 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 LINC00473A8K010 186 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 J3QR06 171 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 CCSO14618 274 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 CDS2O95674 445 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 IGLV1-47P01700 117 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 GPR12P47775 334 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 C11orf44Q8N8P7 122 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 OR51H1Q8NH63 302 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF702PQ9H963 129 aa12.82□□□□□ -0.36
SRGAP2C-201ENST00000304465 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 OOSP1A8MZH6 123 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 ANXA3P12429 323 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 HABP2Q14520 560 aaPredicted RBP12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 TPTE2P1Q5T6R2 138 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 C16orf82Q7Z2V1 217 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 SELENOHQ8IZQ5 122 aaKnown RBP12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 RPEQ96AT9 228 aa12.81□□□□□ -0.36
SRGAP2C-201ENST00000304465 RAB29O14966 203 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 S100GP29377 79 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF137PP52743 207 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 Q5BKY6 102 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 LYG1Q8N1E2 194 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 Q8N2B8 174 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 DDB2Q92466 427 aa12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
SRGAP2C-201ENST00000304465 SMLR1H3BR10 107 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 TSPAN15O95858 294 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 CD24P25063 80 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 VDAC2P45880 294 aaPredicted RBP12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 IL15RAQ13261 267 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 LGI3Q8N145 548 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 DRAXINQ8NBI3 349 aaPredicted RBP12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
SRGAP2C-201ENST00000304465 M0R1X1 148 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 RAMP3O60896 148 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 FBXO24O75426 580 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 HOXB5P09067 269 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 BLCAPP62952 87 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 SRPXP78539 464 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 TMEM268Q5VZI3 342 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 GGNBP1Q5YKI7 109 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 CFHR4Q92496 578 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 IL22RA2Q969J5 263 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 FAM212BQ9NTI7 297 aaPredicted RBP12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 LIN7CQ9NUP9 197 aaKnown RBP12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 CT45A6P0DMU7 189 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 CT45A5P0DMU8 189 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 CT45A7P0DMV0 189 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 RAP2BP61225 183 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 DEFA6Q01524 100 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 DIAPH2-AS1Q14236 149 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 ZNF383Q8NA42 475 aa12.78□□□□□ -0.36
SRGAP2C-201ENST00000304465 TCTEX1D2Q8WW35 142 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms