RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 GFRA1P56159 465 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 EBLN2Q6P2I7 272 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 CLEC2AQ6UVW9 174 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 MTCL1Q9Y4B5 1905 aaKnown RBP11.89□□□□□ -0.51
PRKCB-201ENST00000303531 GCSHP23434 173 aa11.89□□□□□ -0.51
PRKCB-201ENST00000303531 PPIAL4CA0A0B4J2A2 164 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 H3BTX0 84 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 PPIAL4GP0DN37 164 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 GPR61Q9BZJ8 451 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
PRKCB-201ENST00000303531 RFPL3SP0C7P2 107 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 SGK494Q96LW2 274 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 SRIP30626 198 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 MFAP4P55083 255 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 CHCHD2Q9Y6H1 151 aaPredicted RBP11.88□□□□□ -0.51
PRKCB-201ENST00000303531 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 SFTPCP11686 197 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 IFNL4K9M1U5 179 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
PRKCB-201ENST00000303531 COMPP49747 757 aaPredicted RBP11.88□□□□□ -0.51
PRKCB-201ENST00000303531 PPP1R32Q7Z5V6 425 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 ARID2Q68CP9 1835 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 STPG3Q8N7X2 389 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF729A6NN14 1252 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-201ENST00000303531 TGFBR3LH3BV60 316 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 NEU1Q99519 415 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 TIMP4Q99727 224 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 NABP2Q9BQ15 211 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 FOXJ2Q9P0K8 574 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 RTN4RQ9BZR6 473 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 A0A1W2PS18 150 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
PRKCB-201ENST00000303531 CEP250Q9BV73 2442 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 WNT9BO14905 357 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 C2orf68Q2NKX9 166 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 SRSF12Q8WXF0 261 aaKnown RBP11.87□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF146Q15072 292 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 hCG_38984A0A1B0GV85 526 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 MPTX1A8MV57 137 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 ARF6P62330 175 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 CACNA1DQ01668 2161 aa11.87□□□□□ -0.51
PRKCB-201ENST00000303531 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 CHRNA10Q9GZZ6 450 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 MSGN1A6NI15 193 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-201ENST00000303531 OTX1P32242 354 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-201ENST00000303531 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-201ENST00000303531 HEATR5BQ9P2D3 2071 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 LINC00470Q9BZP3 86 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 SP9P0CG40 484 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 RPL39P5Q59GN2 51 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 TMEM186Q96B77 213 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 GRIFINA4D1Z8 144 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 PSG9Q00887 426 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 FAM209BQ5JX69 171 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 NPIPB3Q92617 1050 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 PSMG3Q9BT73 122 aaPredicted RBP11.86□□□□□ -0.51
PRKCB-201ENST00000303531 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 C21orf62-AS1Q17RA5 79 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 RNF115Q9Y4L5 304 aa11.86□□□□□ -0.51
PRKCB-201ENST00000303531 SYNGR3O43761 229 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 EGR1P18146 543 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 DDTP30046 118 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 SFXN3Q9BWM7 321 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 TRAV30A0A087WSZ9 112 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 ANOS1P23352 680 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 GCHFRP30047 84 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 CELA3AP09093 270 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 UQCR10Q9UDW1 63 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 IGKV3D-11A0A0A0MRZ8 115 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 PEAR1Q5VY43 1037 aaPredicted RBP11.85□□□□□ -0.51
PRKCB-201ENST00000303531 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 Q6ZT83 130 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 SIGLEC12Q96PQ1 595 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 SCN4AP35499 1836 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 RRHO14718 337 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 RPRMQ9NS64 109 aa11.85□□□□□ -0.51
PRKCB-201ENST00000303531 NUDT3O95989 172 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms