RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 VCX2Q9H322 139 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 NEUROG1Q92886 237 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 CLDN16Q9Y5I7 305 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 PCOLCEQ15113 449 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 FBXW9Q5XUX1 488 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 SDF2L1Q9HCN8 221 aa12.28□□□□□ -0.44
HIPK3-201ENST00000303296 ADARB2-AS1A8MUL3 147 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 F8WEM9 126 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 CD7P09564 240 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 H1FOOQ8IZA3 346 aaPredicted RBP12.27□□□□□ -0.44
HIPK3-201ENST00000303296 RNF182Q8N6D2 247 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 FDCSPQ8NFU4 85 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 LINC00596Q86U02 117 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 CLDND2Q8NHS1 167 aa12.27□□□□□ -0.44
HIPK3-201ENST00000303296 MRM2Q9UI43 246 aaKnown RBP12.27□□□□□ -0.44
HIPK3-201ENST00000303296 TOMM40O96008 361 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 SCTP09683 121 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 LDLRAD2Q5SZI1 272 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 LURAP1LQ8IV03 231 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 PNKDQ8N490 385 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 OR4X2Q8NGF9 303 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 LNP1A1A4G5 178 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 UCP2P55851 309 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 FNDC4Q9H6D8 234 aaPredicted RBP12.27□□□□□ -0.45
HIPK3-201ENST00000303296 WBP1LQ9NX94 342 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 RGPD1P0DJD0 1748 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 NUP98P52948 1817 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 MMD2Q8IY49 270 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 ORAOV1Q8WV07 137 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.45
HIPK3-201ENST00000303296 RIMKLAQ8IXN7 391 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.45
HIPK3-201ENST00000303296 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
HIPK3-201ENST00000303296 MT-ND6P03923 174 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 SERGEFQ9UGK8 458 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 DSPPQ9NZW4 1301 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 NCOR1O75376 2440 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 A0A1W2PP11 408 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 LHBP01229 141 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 PGFP49763 221 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 RPP25Q9BUL9 199 aaKnown RBP12.26□□□□□ -0.45
HIPK3-201ENST00000303296 TNFRSF12AQ9NP84 129 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 WNT2BQ93097 391 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 SDHCQ99643 169 aaPredicted RBP12.26□□□□□ -0.45
HIPK3-201ENST00000303296 IDI2-AS1Q9NZ38 188 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 DOCK8Q8NF50 2099 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 UNC119Q13432 240 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 C12orf73Q69YU5 71 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 SSBP4Q9BWG4 385 aaPredicted RBP12.26□□□□□ -0.45
HIPK3-201ENST00000303296 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
HIPK3-201ENST00000303296 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 TMEM86BQ8N661 226 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
HIPK3-201ENST00000303296 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 IGHV1OR15-9A0A0B4J2B8 117 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 AGAP20933 346 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 NIT1Q86X76 327 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 NPIPB11E5RHQ5 1161 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
HIPK3-201ENST00000303296 LINC00615Q96LM1 132 aaPredicted RBP12.25□□□□□ -0.45
HIPK3-201ENST00000303296 VKORC1Q9BQB6 163 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 IGHV3-11P01762 117 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 DCAF10Q5QP82 559 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 MYEOVQ96EZ4 313 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
HIPK3-201ENST00000303296 TTTY12Q9BZ98 90 aa12.25□□□□□ -0.45
HIPK3-201ENST00000303296 SPINT1O43278 529 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 IL9P15248 144 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 MPV17P39210 176 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 WDR34Q96EX3 536 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 MS4A6AQ9H2W1 248 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 PATE3B3GLJ2 98 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 OR2H2O95918 312 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 IGHV5-10-1A0A0J9YXX1 117 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 GPR183P32249 361 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 LEPP41159 167 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 ZNF818PQ6ZRF7 136 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 OR11H7Q8NGC8 314 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
HIPK3-201ENST00000303296 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
HIPK3-201ENST00000303296 DPRXA6NFQ7 191 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
HIPK3-201ENST00000303296 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.24□□□□□ -0.45
HIPK3-201ENST00000303296 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
HIPK3-201ENST00000303296 NABP2Q9BQ15 211 aa12.23□□□□□ -0.45
HIPK3-201ENST00000303296 POLEQ07864 2286 aa12.23□□□□□ -0.45
HIPK3-201ENST00000303296 C8orf88P0DMB2 117 aa12.23□□□□□ -0.45
HIPK3-201ENST00000303296 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
HIPK3-201ENST00000303296 ANAPC10Q9UM13 185 aa12.23□□□□□ -0.45
HIPK3-201ENST00000303296 ABCA7Q8IZY2 2146 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms