RNA–Protein interactions for RNA: ENST00000302328.7

SCN11A-201, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN11A, Length 6,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-201ENST00000302328 PXMP4Q9Y6I8 212 aa7.17□□□□□ -1.26
SCN11A-201ENST00000302328 TMSB15BA0A087X1C1 80 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TMEM189A5PLL7 270 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 CRXO43186 299 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 KLF4O43474 513 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 FAM157CP0CG43 387 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 EWSR1Q01844 656 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 BRD3OSQ6XYD6 125 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 RTN4RQ9BZR6 473 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 IGHV3-35A0A0C4DH35 117 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 MARCH11A6NNE9 402 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 NPFFO15130 113 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 CDS2O95674 445 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 PTBP3O95758 552 aaKnown RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 KLRD1Q13241 179 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 Q6ZN92 141 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 FGFRL1Q8N441 504 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 NEUROG1Q92886 237 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 LINC01587Q99440 93 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 COL4A4P53420 1690 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 PQLC2LA1A4F0 135 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 MSMBP08118 114 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 PGA5P0DJD9 388 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 ASPHD2Q6ICH7 369 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 DOCK4Q8N1I0 1966 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 CCDC88CQ9P219 2028 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 AP4M1O00189 453 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 Q1RN00 199 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TMEM241Q24JQ0 296 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 C19orf54Q5BKX5 351 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TMEM91Q6ZNR0 172 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 SELENOHQ8IZQ5 122 aaKnown RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 OSR1Q8TAX0 266 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 NOL4LQ96MY1 436 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TOLLIPQ9H0E2 274 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 KCNK7Q9Y2U2 307 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 A0A0G2JK05 382 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 LOC102723971A0A1B0GUV8 181 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 E9PQ18 207 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 F12P00748 615 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 RPL7P18124 248 aaKnown RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 COL8A2P25067 703 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 CMC4P56277 68 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 MOGAT2Q3SYC2 334 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 NEURL2Q9BR09 285 aa7.16□□□□□ -1.26
SCN11A-201ENST00000302328 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 SIRT4Q9Y6E7 314 aaPredicted RBP7.16□□□□□ -1.26
SCN11A-201ENST00000302328 TRBV5-7A0A0A0MS05 114 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 C11orf94C9JXX5 98 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 E7EQL1 145 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 CD24P25063 80 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 TMEM219Q86XT9 240 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 LHFPL5Q8TAF8 219 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 ATG101Q9BSB4 218 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 MAS1LP35410 378 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 CX3CL1P78423 397 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 SRSF7Q16629 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCN11A-201ENST00000302328 RNF212Q495C1 297 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 ZNF474Q6S9Z5 364 aaPredicted RBP7.15□□□□□ -1.26
SCN11A-201ENST00000302328 DTX1Q86Y01 620 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 LRRC75AQ8NAA5 344 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 AKIP1Q9NQ31 210 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 PTPRZ1P23471 2315 aaPredicted RBP7.15□□□□□ -1.26
SCN11A-201ENST00000302328 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 M0R1W7 72 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 KBTBD11O94819 623 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 PLAUP00749 431 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 IL4P05112 153 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 LYRM2Q9NU23 88 aaPredicted RBP7.15□□□□□ -1.26
SCN11A-201ENST00000302328 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
SCN11A-201ENST00000302328 PITX3O75364 302 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 CLPSP04118 112 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 RNF224P0DH78 156 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 WDR25Q64LD2 544 aaPredicted RBP7.15□□□□□ -1.27
SCN11A-201ENST00000302328 RELL2Q8NC24 303 aaPredicted RBP7.15□□□□□ -1.27
SCN11A-201ENST00000302328 SPNP16150 400 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 RNASEKQ6P5S7 137 aaKnown RBP7.15□□□□□ -1.27
SCN11A-201ENST00000302328 TMEM116Q8NCL8 245 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 GTF3AQ92664 365 aaKnown RBP7.15□□□□□ -1.27
SCN11A-201ENST00000302328 PHLDA3Q9Y5J5 127 aa7.15□□□□□ -1.27
SCN11A-201ENST00000302328 C12orf77C9JDV5 145 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 PDE6DO43924 150 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 G0S2P27469 103 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 VAX1Q5SQQ9 334 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 MINOS1Q5TGZ0 78 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 TMEM222Q9H0R3 208 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 MINOS1-NBL1R4GNA1 71 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 IRF3Q14653 427 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 TMEM97Q5BJF2 176 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 LINC01590Q5TEZ4 76 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 FAM159AQ6UWV7 190 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 C21orf62Q9NYP8 219 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 IGHV3OR16-13A0A075B7E8 117 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 IGHV3-74A0A0B4J1X5 117 aa7.14□□□□□ -1.27
SCN11A-201ENST00000302328 A0A1W2PPQ1 181 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms