RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 C12orf77C9JDV5 145 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
SDC2-201ENST00000302190 OR10J4P0C629 311 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 ID3Q02535 119 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 RBMXL3Q8N7X1 1067 aaKnown RBP11.87□□□□□ -0.51
SDC2-201ENST00000302190 BEND2Q8NDZ0 799 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 FCN1O00602 326 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 GNB1P62873 340 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 ELOBQ15370 118 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 SARAFQ96BY9 339 aa11.87□□□□□ -0.51
SDC2-201ENST00000302190 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 C1QTNF9BB2RNN3 333 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 POM121L2Q96KW2 1035 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 ZGRF1Q86YA3 2104 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 CLDN14O95500 239 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 TNFSF4P23510 183 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 OR5I1Q13606 314 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 MAJINQ3KP22 176 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 ZNF439Q8NDP4 499 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 FAM216AQ8WUB2 273 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 SGK494Q96LW2 274 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 HIST1H2BLQ99880 126 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 COMMD5Q9GZQ3 224 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 NEURL1O76050 574 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 CD1BP29016 333 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 PSG7Q13046 419 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 KIAA1644Q3SXP7 199 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 TIGITQ495A1 244 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 MRPL54Q6P161 138 aaKnown RBP11.86□□□□□ -0.51
SDC2-201ENST00000302190 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 TMEM56Q96MV1 263 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 TXN2Q99757 166 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 ZPBPQ9BS86 351 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
SDC2-201ENST00000302190 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
SDC2-201ENST00000302190 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
SDC2-201ENST00000302190 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
SDC2-201ENST00000302190 ZNF503-AS2A6NEH8 195 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 MPV17P39210 176 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 WNT5AP41221 380 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 SERF2P84101 59 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 NBEAQ8NFP9 2946 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 CEACAM18A8MTB9 384 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 TMPRSS2O15393 492 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 TMEM11P17152 192 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 LHX2P50458 406 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 PSG5Q15238 335 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
SDC2-201ENST00000302190 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
SDC2-201ENST00000302190 SIAH2O43255 324 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 PLAUP00749 431 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
SDC2-201ENST00000302190 IER3P46695 156 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 CCL8P80075 99 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 JOSD1Q15040 202 aaPredicted RBP11.84□□□□□ -0.51
SDC2-201ENST00000302190 ZNF525Q8N782 197 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 CCL17Q92583 94 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 PAX5Q02548 391 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 NHLRC2Q8NBF2 726 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 CD33P20138 364 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 PRDX2P32119 198 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 CAMPP49913 170 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 CLDN18P56856 261 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 STUMQ69YW2 141 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 VWA1Q6PCB0 445 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
SDC2-201ENST00000302190 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 CBY3A6NI87 242 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 B4E171 279 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 C9orf172C9J069 976 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 PSPNO60542 156 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 B3GALT5-AS1P59052 145 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 PRR31Q5SQ13 230 aa11.83□□□□□ -0.51
SDC2-201ENST00000302190 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.51
SDC2-201ENST00000302190 ATP5G3P48201 142 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 SRSF6Q13247 344 aaKnown RBP11.83□□□□□ -0.52
SDC2-201ENST00000302190 PEAR1Q5VY43 1037 aaPredicted RBP11.83□□□□□ -0.52
SDC2-201ENST00000302190 OR13A1Q8NGR1 328 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 OR10X1Q8NGY0 326 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 CXXC4Q9H2H0 198 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 ATRXP46100 2492 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 B4DEV8 164 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 GZMBP10144 247 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 IL15RAQ13261 267 aa11.83□□□□□ -0.52
SDC2-201ENST00000302190 TRIP6Q15654 476 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms