RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LOC102723971A0A1B0GUV8 181 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 IGLV2-14P01704 120 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 BCL2P10415 239 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 MPV17P39210 176 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 GALMQ96C23 342 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 PKIBQ9C010 78 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 RBKSQ9H477 322 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 SMDT1Q9H4I9 107 aa11.3□□□□□ -0.6
CTDP1-202ENST00000299543 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTDP1-202ENST00000299543 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 Q6ZN92 141 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 ATOH7Q8N100 152 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 FER1L6-AS2Q96M78 137 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 PTPRZ1P23471 2315 aaPredicted RBP11.29□□□□□ -0.6
CTDP1-202ENST00000299543 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 A0A1B0GW64 132 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 SMPD2O60906 423 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 ZNF737O75373 536 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 HOXC12P31275 282 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
CTDP1-202ENST00000299543 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
CTDP1-202ENST00000299543 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
CTDP1-202ENST00000299543 CNN1P51911 297 aaKnown RBP11.28□□□□□ -0.6
CTDP1-202ENST00000299543 RND2P52198 227 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 BSXQ3C1V8 233 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 BAGE2Q86Y30 109 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 LAMA5O15230 3695 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 C21orf140B9A014 251 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
CTDP1-202ENST00000299543 EGR1P18146 543 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 GCH1P30793 250 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
CTDP1-202ENST00000299543 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 S1PR2O95136 353 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 IGHV1-2P23083 117 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 SSTR5P35346 364 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 SOX8P57073 446 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
CTDP1-202ENST00000299543 GATAD1Q8WUU5 269 aa11.28□□□□□ -0.6
CTDP1-202ENST00000299543 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTDP1-202ENST00000299543 ZG16O60844 167 aa11.27□□□□□ -0.6
CTDP1-202ENST00000299543 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.6
CTDP1-202ENST00000299543 OR2T10Q8NGZ9 312 aa11.27□□□□□ -0.6
CTDP1-202ENST00000299543 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.6
CTDP1-202ENST00000299543 SLC35E1Q96K37 410 aa11.27□□□□□ -0.6
CTDP1-202ENST00000299543 PSG11Q9UQ72 335 aa11.27□□□□□ -0.6
CTDP1-202ENST00000299543 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 SPINK4O60575 86 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 HBZP02008 142 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 CCKARP32238 428 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM241Q24JQ0 296 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 OR4F5Q8NH21 305 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 LSM10Q969L4 123 aaKnown RBP11.27□□□□□ -0.61
CTDP1-202ENST00000299543 OR4F4Q96R69 305 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
CTDP1-202ENST00000299543 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 ZFP30Q9Y2G7 519 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 HNRNPA3P51991 378 aaKnown RBP11.27□□□□□ -0.61
CTDP1-202ENST00000299543 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.61
CTDP1-202ENST00000299543 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
CTDP1-202ENST00000299543 TP73-AS1Q9UF72 201 aa11.27□□□□□ -0.61
CTDP1-202ENST00000299543 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 POLEQ07864 2286 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM30CPA0ZSE6 113 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
CTDP1-202ENST00000299543 C16orf54Q6UWD8 224 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 H2BFWTQ7Z2G1 175 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 MIEN1Q9BRT3 115 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 CD59P13987 128 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 Q6ZWC4 215 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 Q8IYB0 196 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
CTDP1-202ENST00000299543 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ODAMA1E959 279 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 B4DEV8 164 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms