RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
SCN3B-201ENST00000299333 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 CD8AP01732 235 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PRTN3P24158 256 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF56Q15929 161 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 CCL13Q99616 98 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 NABP2Q9BQ15 211 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 C17orf51A8MQB3 221 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 RAMP1O60894 148 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 IGKV1D-16P01601 117 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 LIMS1P48059 325 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 LAMTOR1Q6IAA8 161 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 OR51G1Q8NGK1 321 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PRDM13Q9H4Q3 707 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 CISD3P0C7P0 127 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 SUMO2P61956 95 aaKnown RBP12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PSG9Q00887 426 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 STPG3Q8N7X2 389 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PRELID3AQ96N28 172 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 G6PC2Q9NQR9 355 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 RPRMQ9NS64 109 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 TCFL5Q9UL49 500 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 MSGN1A6NI15 193 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF815PA8K554 130 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 UPK3AO75631 287 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 UCP3P55916 312 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 PSG4Q00888 419 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 C1orf100Q5SVJ3 147 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 AICDAQ9GZX7 198 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
SCN3B-201ENST00000299333 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 TIMM23BQ5SRD1 257 aa12.75□□□□□ -0.37
SCN3B-201ENST00000299333 RCC1LQ96I51 464 aaKnown RBP12.75□□□□□ -0.37
SCN3B-201ENST00000299333 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
SCN3B-201ENST00000299333 C9orf153Q5TBE3 101 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 SMIM8Q96KF7 97 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 FAM117AQ9C073 453 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 SF3B6Q9Y3B4 125 aaKnown RBP12.74□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM229AB2RXF0 380 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 REG1AP05451 166 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 SDHCQ99643 169 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-201ENST00000299333 TRBV5-7A0A0A0MS05 114 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 A8MWV9 139 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 MARS2Q96GW9 593 aaKnown RBP12.74□□□□□ -0.37
SCN3B-201ENST00000299333 KBTBD11-OT1A0A1B0GTJ5 212 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 MGST3O14880 152 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 TBX6O95947 436 aaPredicted RBP12.74□□□□□ -0.37
SCN3B-201ENST00000299333 IGHV3-48P01763 117 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 ANKRD33Q7Z3H0 272 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 VKORC1L1Q8N0U8 176 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 LPAR2Q9HBW0 351 aa12.74□□□□□ -0.37
SCN3B-201ENST00000299333 A0A1W2PPV9 198 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 PSMB11A5LHX3 300 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 ACSF3Q4G176 576 aaPredicted RBP12.73□□□□□ -0.37
SCN3B-201ENST00000299333 SERF1AO75920 110 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 DRD3P35462 400 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
SCN3B-201ENST00000299333 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 FAM181AQ8N9Y4 354 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 OR5AN1Q8NGI8 311 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 MUC21A0A0G2JKD1 596 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 MUC21A0A140T8X8 626 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 GPX1P07203 203 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 MUC21Q5SSG8 566 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 CDX4O14627 284 aaPredicted RBP12.73□□□□□ -0.37
SCN3B-201ENST00000299333 CA7P43166 264 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 ZNF415Q09FC8 603 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 FAM27BQ5VT28 67 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 CCDC144NLQ6NUI1 221 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 PLA2G2FQ9BZM2 168 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 NRN1Q9NPD7 142 aa12.73□□□□□ -0.37
SCN3B-201ENST00000299333 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 PGPEP1LA6NFU8 196 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 NDUFA3O95167 84 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 MPV17P39210 176 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-201ENST00000299333 CT55Q8WUE5 264 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 WFDC6Q9BQY6 131 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 LHX9Q9NQ69 397 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 LIFP15018 202 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 TCF23Q7RTU1 214 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 DDB2Q92466 427 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
SCN3B-201ENST00000299333 CD160O95971 181 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 HOXC4P09017 264 aaPredicted RBP12.72□□□□□ -0.37
SCN3B-201ENST00000299333 COL9A1P20849 921 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 RAB9AP51151 201 aa12.72□□□□□ -0.37
SCN3B-201ENST00000299333 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
SCN3B-201ENST00000299333 FBXW9Q5XUX1 488 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms