RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ZNHIT1O43257 154 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 COL9A1P20849 921 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CTGFP29279 349 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 SRIP30626 198 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CX3CL1P78423 397 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 NHLRC3Q5JS37 347 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CCDC144NLQ6NUI1 221 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FOXC2Q99958 501 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 SPCS1Q9Y6A9 102 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 H3BRM9 83 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 DANCRP0C864 163 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 RPL31P62899 125 aaKnown RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 MIC13Q5XKP0 118 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TMEM92Q6UXU6 159 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TTC9CQ8N5M4 171 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 COX14Q96I36 57 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 ZNF414Q96IQ9 312 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 ST6GALNAC2Q9UJ37 374 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 S1PR2O95136 353 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 APOMO95445 188 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CA1P00915 261 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CD8AP01732 235 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 HMGA2P52926 109 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 MEIG1Q5JSS6 88 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 LAMTOR1Q6IAA8 161 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 LAMTOR2Q9Y2Q5 125 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TAF1LQ8IZX4 1826 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 HAX1O00165 279 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PRDX2P32119 198 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 NXPH1P58417 271 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 RPS11P62280 158 aaKnown RBP eCLIP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 IRF3Q14653 427 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 C1orf174Q8IYL3 243 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 ZPLD1Q8TCW7 415 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TRPM7Q96QT4 1865 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 MTCL1Q9Y4B5 1905 aaKnown RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 J3QT63 122 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 LDLRAD4O15165 306 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 SSTR5P35346 364 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TMEM56-RWDD3S4R434 201 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 IGHV1OR15-9A0A0B4J2B8 117 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 H0Y980 276 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CLDN14O95500 239 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 INAFM2P0DMQ5 153 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CCL3P10147 92 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FCGR2BP31994 310 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 Q5PR19 223 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 C9orf50Q5SZB4 431 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FAM74A4Q5TZK3 123 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 SELENOHQ8IZQ5 122 aaKnown RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 ZNF236Q9UL36 1845 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TRPM6Q9BX84 2022 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 DIDO1Q9BTC0 2240 aaKnown RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PPIAL4EA0A075B759 164 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PPIAL4DF5H284 164 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 ITGB1BP1O14713 200 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PPIAL4FP0DN26 164 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 DUX5Q96PT3 197 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 LHX9Q9NQ69 397 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 NPDC1Q9NQX5 325 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PPIAL4AQ9Y536 164 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 RTTNQ86VV8 2226 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PLA2G10O15496 165 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 OR52M1Q8NGK5 317 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FAM60AQ9NP50 221 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 GPR132Q9UNW8 380 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 GBF1Q92538 1859 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 IGHV5-10-1A0A0J9YXX1 117 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TMEM50AO95807 157 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FSTP19883 344 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 RPL8P62917 257 aaKnown RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 DMRTA1Q5VZB9 504 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 INO80CQ6PI98 192 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 FAM106CPP0CH98 169 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 PIMREGQ9BSJ6 248 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 TTTY12Q9BZ98 90 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 COLQQ9Y215 455 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CHD5Q8TDI0 1954 aa4.8□□□□□ -1.64
CPSF2-201ENST00000298875 CACNA1IQ9P0X4 2223 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 NPFFO15130 113 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 MMP23AO75900 390 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 PRSS2P07478 247 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 HKR1P10072 659 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 CFAP161Q6P656 301 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 TPRX1Q8N7U7 411 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
CPSF2-201ENST00000298875 CISD3P0C7P0 127 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 COX6B1P14854 86 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 NANOS3P60323 173 aaKnown RBP4.79□□□□□ -1.64
CPSF2-201ENST00000298875 C1QL3Q5VWW1 255 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 C9orf40Q8IXQ3 194 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 VKORC1L1Q8N0U8 176 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 TMEM101Q96IK0 257 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 ZNF48Q96MX3 618 aaPredicted RBP4.79□□□□□ -1.64
CPSF2-201ENST00000298875 CCL13Q99616 98 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 DTX4Q9Y2E6 619 aa4.79□□□□□ -1.64
CPSF2-201ENST00000298875 A0A1B0GW64 132 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms