RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 AP1S3Q96PC3 154 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 ZPBPQ9BS86 351 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 PXMP4Q9Y6I8 212 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 OR7C2O60412 319 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 IGKV1-5P01602 117 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 KRTCAP3Q53RY4 240 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 SSBP3Q9BWW4 388 aaPredicted RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 DPRXA6NFQ7 191 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 RAMP3O60896 148 aa12.55□□□□□ -0.4
SPIDR-201ENST00000297423 ZNF331Q9NQX6 463 aaPredicted RBP12.55□□□□□ -0.4
SPIDR-201ENST00000297423 SNAI2O43623 268 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 MT-CO3P00414 261 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 NGFP01138 241 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 CYC1P08574 325 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 OR8B8Q15620 311 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 RPEL1Q2QD12 228 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 WIPI1Q5MNZ9 446 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-201ENST00000297423 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
SPIDR-201ENST00000297423 COL8A2P25067 703 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 SLC24A4Q8NFF2 622 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 LCN2P80188 198 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 PRAMEF5Q5TYX0 476 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 PRAMEF6Q5VXH4 476 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
SPIDR-201ENST00000297423 MMD2Q8IY49 270 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 ZNF441Q8N8Z8 693 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 OR5A2Q8NGI9 324 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 OR2H1Q9GZK4 316 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 CA1P00915 261 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-201ENST00000297423 SSR4P51571 173 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 LRFN3Q9BTN0 628 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 NPCDR1Q9BY65 106 aa12.54□□□□□ -0.4
SPIDR-201ENST00000297423 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-201ENST00000297423 VAMP5O95183 116 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 IL6RP08887 468 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-201ENST00000297423 NPPCP23582 126 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 PCBD1P61457 104 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
SPIDR-201ENST00000297423 ABHD14BQ96IU4 210 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 ZNF703Q9H7S9 590 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-201ENST00000297423 M0R2Z0 102 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 RIPPLY3P57055 190 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
SPIDR-201ENST00000297423 TPTE2P1Q5T6R2 138 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 SAXO1Q8IYX7 474 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 SSC4DQ8WTU2 575 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 RNF2Q99496 336 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 RNASE7Q9H1E1 156 aaKnown RBP12.53□□□□□ -0.4
SPIDR-201ENST00000297423 NPIPB13A6NJU9 1138 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 NPIPB4C9JG80 1138 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 S1PR2O95136 353 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 TFF1P04155 84 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 CD59P13987 128 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 GDF1P27539 372 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 SMIM15Q7Z3B0 74 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 C12orf49Q9H741 205 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 TMEM38BQ9NVV0 291 aa12.53□□□□□ -0.4
SPIDR-201ENST00000297423 RHBDL1O75783 438 aa12.52□□□□□ -0.4
SPIDR-201ENST00000297423 LHX2P50458 406 aa12.52□□□□□ -0.4
SPIDR-201ENST00000297423 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.4
SPIDR-201ENST00000297423 SGK494Q96LW2 274 aa12.52□□□□□ -0.4
SPIDR-201ENST00000297423 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.4
SPIDR-201ENST00000297423 GNG4P50150 75 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 CATR1Q13166 79 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 TIGITQ495A1 244 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 FBLN7Q53RD9 439 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 OR4A16Q8NH70 328 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 NABP1Q96AH0 204 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 PDE6DO43924 150 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 P04436 131 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 OR10J4P0C629 311 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 DRAM1Q8N682 238 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
SPIDR-201ENST00000297423 MCRIP2Q9BUT9 160 aaKnown RBP12.52□□□□□ -0.41
SPIDR-201ENST00000297423 IGKV1-39P01597 117 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 IGKV1D-39P04432 117 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 PCOLCEQ15113 449 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 OR52L2PQ8NGH6 319 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 CT55Q8WUE5 264 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 PYGO2Q9BRQ0 406 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 TCFL5Q9UL49 500 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 IGHV1-45A0A0A0MS14 117 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 GPR6P46095 362 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-201ENST00000297423 FGF12P61328 243 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 GAGE1Q13065 139 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 ODAMA1E959 279 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 SYNGR3O43761 229 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 FCGR3BO75015 233 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms