RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 PPIFP30405 207 aaKnown RBP10.03□□□□□ -0.8
SNIP1-201ENST00000296215 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
SNIP1-201ENST00000296215 ZNF585BQ52M93 769 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 PRSS41Q7RTY9 318 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 KREMEN2Q8NCW0 462 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 RASL10BQ96S79 203 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
SNIP1-201ENST00000296215 APOHP02749 345 aaPredicted RBP10.02□□□□□ -0.8
SNIP1-201ENST00000296215 WFDC2Q14508 124 aa10.02□□□□□ -0.8
SNIP1-201ENST00000296215 SUSD3Q96L08 255 aa10.02□□□□□ -0.8
SNIP1-201ENST00000296215 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.8
SNIP1-201ENST00000296215 CCL28Q9NRJ3 127 aa10.02□□□□□ -0.8
SNIP1-201ENST00000296215 BEX4Q9NWD9 120 aaPredicted RBP10.02□□□□□ -0.8
SNIP1-201ENST00000296215 TMEM202A6NGA9 273 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 OR2H2O95918 312 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 KLRD1Q13241 179 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.02□□□□□ -0.81
SNIP1-201ENST00000296215 FBLN5Q9UBX5 448 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 FMN2Q9NZ56 1722 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 GATA2P23769 480 aaPredicted RBP10.02□□□□□ -0.81
SNIP1-201ENST00000296215 TWIST1Q15672 202 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 FGF14Q92915 247 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 CHCHD1Q96BP2 118 aaKnown RBP10.02□□□□□ -0.81
SNIP1-201ENST00000296215 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
SNIP1-201ENST00000296215 KIF13BQ9NQT8 1826 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
SNIP1-201ENST00000296215 MON2Q7Z3U7 1717 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 M0R3E3 92 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 COX7A2P2O60397 106 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 SELPP16109 830 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 ZP4Q12836 540 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 AMTNQ6UX39 209 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 NHSL1Q5SYE7 1610 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 FAM90A27PA6NNH2 459 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 SMAD7O15105 426 aaKnown RBP10.01□□□□□ -0.81
SNIP1-201ENST00000296215 PAX1P15863 534 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 SRD5A2P31213 254 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 EMDP50402 254 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 CSRP2Q16527 193 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 ZPLD1Q8TCW7 415 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF688P0C7X2 276 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 CD52P31358 61 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 CCL7P80098 99 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 GATAD1Q8WUU5 269 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 ONECUT1Q9UBC0 465 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 SMPXQ9UHP9 88 aa10.01□□□□□ -0.81
SNIP1-201ENST00000296215 IGHV3-7P01780 117 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 COX8AP10176 69 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 COLCA1Q6ZS62 124 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 FAM174AQ8TBP5 190 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF502Q8TBZ5 544 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 RDH5Q92781 318 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 VSIRQ9H7M9 311 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 TIMM9Q9Y5J7 89 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 EPPINO95925 133 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 DLX1P56177 255 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 SUPT4H1P63272 117 aaKnown RBP10□□□□□ -0.81
SNIP1-201ENST00000296215 DOCK8Q8NF50 2099 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 SHROOM3Q8TF72 1996 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
SNIP1-201ENST00000296215 PDCD6O75340 191 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 TRACP01848 142 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 PVRP15151 417 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 CACNG7P62955 275 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 FAM159AQ6UWV7 190 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 OR1L1Q8NH94 360 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 EMC6Q9BV81 110 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 TMEM160Q9NX00 188 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 CKAP5Q14008 2032 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 REG1AP05451 166 aa10□□□□□ -0.81
SNIP1-201ENST00000296215 RNASE7Q9H1E1 156 aaKnown RBP10□□□□□ -0.81
SNIP1-201ENST00000296215 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
SNIP1-201ENST00000296215 TMED7-TICAM2A0A0A6YYA0 188 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 C18orf32Q8TCD1 76 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
SNIP1-201ENST00000296215 FER1L6Q2WGJ9 1857 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 IGKV6D-21A0A0A0MT36 114 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 TRBV5-4A0A0C4DH59 114 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 J3QRE1 110 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 M0QZQ0 153 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 SPATA31B1PQ5VZV4 182 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 MGST2Q99735 147 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 IGLV3-10A0A075B6K4 115 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 A0A1W2PRD5 423 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 A0A1W2PRF3 423 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 A0A1W2PRM7 423 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 PRSS8Q16651 343 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 INO80CQ6PI98 192 aaPredicted RBP9.99□□□□□ -0.81
SNIP1-201ENST00000296215 GJC3Q8NFK1 279 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
SNIP1-201ENST00000296215 ZNF56Q15929 161 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 ASCL2Q99929 193 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 IL36RNQ9UBH0 155 aa9.98□□□□□ -0.81
SNIP1-201ENST00000296215 LOC102723996A0A087X1L8 192 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms