RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF729A6NN14 1252 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 RELBQ01201 579 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 LAMTOR1Q6IAA8 161 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 UCN2Q96RP3 112 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 HES7Q9BYE0 225 aa10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 SPTBN5Q9NRC6 3674 aaKnown RBP10.15□□□□□ -0.78
SYNGAP1-201ENST00000293748 FOLR2P14207 255 aa10.15□□□□□ -0.79
SYNGAP1-201ENST00000293748 ERASQ7Z444 233 aa10.15□□□□□ -0.79
SYNGAP1-201ENST00000293748 TUSC5Q8IXB3 177 aa10.15□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM140Q9NV12 185 aa10.15□□□□□ -0.79
SYNGAP1-201ENST00000293748 HYPMO75409 117 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 CEBPDP49716 269 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 RNF7Q9UBF6 113 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 AREGP15514 252 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 Q0VFX4 171 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR10S1Q8NGN2 331 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 CLEC5AQ9NY25 188 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 WNT5AP41221 380 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 TCTAP57738 103 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 CEACAM21Q3KPI0 293 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 HIKESHIQ53FT3 197 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 MARS2Q96GW9 593 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 RARRES2Q99969 163 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 CCDC88CQ9P219 2028 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 DHRS7CA6NNS2 312 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 H3BVH4 76 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 SOD3P08294 240 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 LGALS7P47929 136 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 UCP3P55916 312 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 SLC35B1P78383 322 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF506Q5JVG8 444 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 MTURNQ8N3F0 131 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 ABHD3Q8WU67 409 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 PSMG3Q9BT73 122 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM70Q9BUB7 260 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 QTRT1Q9BXR0 403 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR51B2Q9Y5P1 312 aa10.14□□□□□ -0.79
SYNGAP1-201ENST00000293748 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF292O60281 2723 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 TGFBR3LH3BV60 316 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 VENTXO95231 258 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF708P17019 499 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZP1P60852 638 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 FHL5Q5TD97 284 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 KCNK17Q96T54 332 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 J3QKU1 62 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 HLA-DRB1P01911 266 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 FAM222BQ8WU58 562 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF385AQ96PM9 386 aaKnown RBP10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 M0R3E3 92 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 KIR2DL2P43627 348 aaPredicted RBP10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 RAB1CQ92928 201 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 CTHRC1Q96CG8 243 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 GPR146Q96CH1 333 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 WFDC6Q9BQY6 131 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 IGF2RP11717 2491 aa10.13□□□□□ -0.79
SYNGAP1-201ENST00000293748 AGFG2O95081 481 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 AMY1AP04745 511 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 LCN2P80188 198 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 EFNB1P98172 346 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 LRRC75BQ2VPJ9 315 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 MOGAT3Q86VF5 341 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 PARLQ9H300 379 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 HIGD1AQ9Y241 93 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 EYSQ5T1H1 3165 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 OR4C46A6NHA9 309 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 TMEM14DPA8MWL7 114 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 CCL3P10147 92 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 TAS2R60P59551 318 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 C2orf68Q2NKX9 166 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 IGFL2Q6UWQ7 119 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 SELENOHQ8IZQ5 122 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 SLC25A40Q8TBP6 338 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 PMCHL2Q9BQD1 86 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 MGST3O14880 152 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF735P0CB33 412 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 HOXA4Q00056 320 aaPredicted RBP10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF600Q6ZNG1 722 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 C1orf174Q8IYL3 243 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 RBKSQ9H477 322 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 SCTP09683 121 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 TWIST1Q15672 202 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 LINC01590Q5TEZ4 76 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 ZNF788Q6ZQV5 615 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 LINC00469Q8N7U9 141 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 TUBA4BQ9H853 241 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 INSIG2Q9Y5U4 225 aa10.12□□□□□ -0.79
SYNGAP1-201ENST00000293748 NPTNQ9Y639 398 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms