RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 HTD2P86397 168 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 HOXA4Q00056 320 aaPredicted RBP13.88□□□□□ -0.19
CPSF4-201ENST00000292476 ATP6V1FQ16864 119 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 DTX2Q86UW9 622 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 FGFRL1Q8N441 504 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 DEFB108BQ8NET1 73 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 YPEL4Q96NS1 127 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 GAFA1Q96PS6 74 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 SIRT7Q9NRC8 400 aa13.88□□□□□ -0.19
CPSF4-201ENST00000292476 C5orf52A6NGY3 159 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 B4DEV8 164 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 H3BP45 60 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 H3BQ15 152 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 NDUFS6O75380 124 aaKnown RBP13.87□□□□□ -0.19
CPSF4-201ENST00000292476 HBZP02008 142 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 S100A8P05109 93 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 ZNF16P17020 682 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-201ENST00000292476 AKR1D1P51857 326 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 EDDM3BP56851 147 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 UBE2KP61086 200 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 TNFRSF9Q07011 255 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 TMEM30BQ3MIR4 351 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 FAM201AQ5SY85 155 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 TMEM14EPQ6UXP3 125 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 ZNF66Q6ZN08 573 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 CENPVQ7Z7K6 275 aaPredicted RBP13.87□□□□□ -0.19
CPSF4-201ENST00000292476 MRGPRDQ8TDS7 321 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 DYSFO75923 2080 aa13.87□□□□□ -0.19
CPSF4-201ENST00000292476 A0A1B0GV50 99 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 UBE2CO00762 179 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 TMPRSS2O15393 492 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 LY86O95711 162 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 IAPPP10997 89 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 LILRB2Q8N423 598 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 OR1L1Q8NH94 360 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 P2RX4Q99571 388 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 CCL13Q99616 98 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 NIPSNAP3BQ9BS92 247 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 C20orf24Q9BUV8 137 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
CPSF4-201ENST00000292476 KAAG1Q9UBP8 84 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 PUS1Q9Y606 427 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPSF4-201ENST00000292476 DCHS2Q6V1P9 2916 aa13.86□□□□□ -0.19
CPSF4-201ENST00000292476 TRGV10A0A0A0MS01 117 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 A6NNC1 897 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 OR2C1O95371 312 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 TFF1P04155 84 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 METTL15P1P0C7V9 234 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 RPL35P42766 123 aaKnown RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 HAGHQ16775 308 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 IZUMO4Q1ZYL8 232 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 LRRC10Q5BKY1 277 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 C11orf71Q6IPW1 123 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 ZFP82Q8N141 532 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 OR13A1Q8NGR1 328 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 C2CD4CQ8TF44 421 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 OR2D2Q9H210 308 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 METTL1Q9UBP6 276 aaKnown RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 RAB29O14966 203 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 S100A6P06703 90 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 S100A12P80511 92 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 MEF2CQ06413 473 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 ARL16Q0P5N6 197 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 PNRC1Q12796 327 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 ZNF429Q86V71 674 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 EDARADDQ8WWZ3 215 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 RAB39BQ96DA2 213 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 CIB3Q96Q77 187 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 RPRMQ9NS64 109 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.85□□□□□ -0.19
CPSF4-201ENST00000292476 JPT1Q9UK76 154 aa13.85□□□□□ -0.19
CPSF4-201ENST00000292476 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 NDUFB3O43676 98 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 IFNA1P01562 189 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 IFNA17P01571 189 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 BCL2P10415 239 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 TAGLN2P37802 199 aaKnown RBP13.84□□□□□ -0.19
CPSF4-201ENST00000292476 MEOX2P50222 304 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 SLC38A11Q08AI6 406 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 HEPN1Q6WQI6 88 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 TPRX1Q8N7U7 411 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPSF4-201ENST00000292476 CORO2AQ92828 525 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 ISOC2Q96AB3 205 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 C12orf57Q99622 126 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 HSD17B10Q99714 261 aaKnown RBP13.84□□□□□ -0.19
CPSF4-201ENST00000292476 TCEAL7Q9BRU2 100 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 RBKSQ9H477 322 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 SLC25A10Q9UBX3 287 aaPredicted RBP13.84□□□□□ -0.19
CPSF4-201ENST00000292476 ITPR2Q14571 2701 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 FBN2P35556 2912 aa13.84□□□□□ -0.19
CPSF4-201ENST00000292476 C15orf65H3BRN8 121 aa13.83□□□□□ -0.2
CPSF4-201ENST00000292476 SMIM6P0DI80 62 aa13.83□□□□□ -0.2
CPSF4-201ENST00000292476 DAOP14920 347 aa13.83□□□□□ -0.2
CPSF4-201ENST00000292476 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms