RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TBX6O95947 436 aaPredicted RBP15□□□□□ -0.01
PCDHA13-201ENST00000289272 TTC32Q5I0X7 151 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 CALHM1Q8IU99 346 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 MBD3L1Q8WWY6 194 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 RLFQ13129 1914 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 GREB1Q4ZG55 1949 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 RPL23P62829 140 aaKnown RBP15□□□□□ -0.01
PCDHA13-201ENST00000289272 ASPHD2Q6ICH7 369 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 SLC35E4Q6ICL7 350 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF430Q9H8G1 570 aaPredicted RBP15□□□□□ -0.01
PCDHA13-201ENST00000289272 FOXD3Q9UJU5 478 aaPredicted RBP15□□□□□ -0.01
PCDHA13-201ENST00000289272 GRIFINA4D1Z8 144 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 TMEM189A5PLL7 270 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF716A6NP11 495 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 TTTY12Q9BZ98 90 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 MAP1LC3AQ9H492 121 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 FBLL1A6NHQ2 334 aaKnown RBP15□□□□□ -0.01
PCDHA13-201ENST00000289272 FBLN7Q53RD9 439 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF818PQ6ZRF7 136 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 ABHD3Q8WU67 409 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 GATAD1Q8WUU5 269 aa15□□□□□ -0.01
PCDHA13-201ENST00000289272 MGST3O14880 152 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF205O95201 554 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 UQCRFS1P47985 274 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 SAMD13Q5VXD3 122 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 PTPRZ1P23471 2315 aaPredicted RBP14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 CDX4O14627 284 aaPredicted RBP14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 SRSF3P84103 164 aaKnown RBP14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 SLC25A40Q8TBP6 338 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 UNC13CQ8NB66 2214 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 CDIPTO14735 213 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 SLC25A45Q8N413 288 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 DIRC2Q96SL1 478 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 C16orf97H3BN30 126 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 HSPE1P61604 102 aaKnown RBP14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 P2RY6Q15077 328 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 C1orf185Q5T7R7 199 aa14.99□□□□□ -0.01
PCDHA13-201ENST00000289272 LMX1BO60663 402 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 ARF6P62330 175 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 TCF24Q7RTU0 167 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 SLC25A28Q96A46 364 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 NPCDR1Q9BY65 106 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 A0A0J9YW62 118 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 AHRRA9YTQ3 701 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF324BQ6AW86 544 aaPredicted RBP14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 CYTL1Q9NRR1 136 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 RP1L1Q8IWN7 2480 aaPredicted RBP14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 MEX3AA1L020 520 aaKnown RBP14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 OR4C46A6NHA9 309 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 NUDT3O95989 172 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 CBLN1P23435 193 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 GPX4P36969 197 aaPredicted RBP14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF137PP52743 207 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 RAB37Q96AX2 223 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 HARBI1Q96MB7 349 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 RNF7Q9UBF6 113 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 CHD5Q8TDI0 1954 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 A0A1W2PR77 199 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 CEACAM1P13688 526 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 PSG4Q00888 419 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 MIC13Q5XKP0 118 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 CCL17Q92583 94 aa14.98□□□□□ -0.01
PCDHA13-201ENST00000289272 TRAV39A0A0B4J263 110 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 SH2D7A6NKC9 451 aaPredicted RBP14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 H3BVH4 76 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 LYL1P12980 280 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 TNXAQ16473 311 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 COPS9Q8WXC6 57 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 OR8B2Q96RD0 313 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 ASCL3Q9NQ33 180 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 TRAV9-2A0A087WT02 112 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF146Q15072 292 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 C5orf30Q96GV9 206 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 ABHD14AQ9BUJ0 271 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 IZUMO1RA6ND01 250 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 C17orf51A8MQB3 221 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 EFEMP2O95967 443 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 EGR4Q05215 589 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 CEACAM18A8MTB9 384 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 C1QTNF9BB2RNN3 333 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 IGLV3-19P01714 112 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 Q6AWC8 147 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 JPT1Q9UK76 154 aa14.97□□□□□ -0.01
PCDHA13-201ENST00000289272 IGKV3-11P04433 115 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 ADRA2AP08913 450 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 TMPRSS3P57727 454 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 PLPPR2Q96GM1 343 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 GNB1LQ9BYB4 327 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 JKAMPQ9P055 326 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 HOXA4Q00056 320 aaPredicted RBP14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 SMAGPQ0VAQ4 97 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 OR4X2Q8NGF9 303 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 BRWD1Q9NSI6 2320 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 CENPWQ5EE01 88 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 TMEM54Q969K7 222 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 UFC1Q9Y3C8 167 aa14.96□□□□□ -0.01
PCDHA13-201ENST00000289272 ZNF525Q8N782 197 aa14.96□□□□□ -0.02
PCDHA13-201ENST00000289272 FAM131CQ96AQ9 280 aa14.96□□□□□ -0.02
PCDHA13-201ENST00000289272 HIST1H4GQ99525 98 aa14.96□□□□□ -0.02
PCDHA13-201ENST00000289272 H0YIZ8 118 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms