RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PRDM13Q9H4Q3 707 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 TNFRSF19Q9NS68 423 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 IGKV1-39P01597 117 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 IGKV1D-39P04432 117 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 RPA2P15927 270 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 CXCL2P19875 107 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 VDAC1P21796 283 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 RPL30P62888 115 aaKnown RBP12.41□□□□□ -0.42
NCK1-201ENST00000288986 PRIMA1Q86XR5 153 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
NCK1-201ENST00000288986 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
NCK1-201ENST00000288986 RPEQ96AT9 228 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 RNF126Q9BV68 326 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 MEGF9Q9H1U4 602 aa12.41□□□□□ -0.42
NCK1-201ENST00000288986 C2CD3Q4AC94 2353 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 H0YIZ8 118 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 BRWD1-AS2P59051 145 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 CATR1Q13166 79 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 SSX3Q99909 188 aa12.4□□□□□ -0.42
NCK1-201ENST00000288986 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 SERPINE2P07093 398 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 IL3RAP26951 378 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 DUTP33316 252 aaKnown RBP12.39□□□□□ -0.43
NCK1-201ENST00000288986 IER3P46695 156 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 GPR12P47775 334 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 RAB13P51153 203 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
NCK1-201ENST00000288986 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 TPTE2P1Q5T6R2 138 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 SSMEM1Q8WWF3 244 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 GON7Q9BXV9 100 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 ESM1Q9NQ30 184 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 TNFSF18Q9UNG2 199 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 DNAJC9-AS1A6NH13 148 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 LINC00473A8K010 186 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 VENTXO95231 258 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 SLC25A6P12236 298 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 RAB32Q13637 225 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 PRSS54Q6PEW0 395 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 OR4D5Q8NGN0 318 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 THAP6Q8TBB0 222 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
NCK1-201ENST00000288986 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
NCK1-201ENST00000288986 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 RGS13O14921 159 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 ARPC5O15511 151 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 ARHGDIBP52566 201 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 ZNF345Q14585 488 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 LRRC75BQ2VPJ9 315 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 GSKIPQ9P0R6 139 aa12.38□□□□□ -0.43
NCK1-201ENST00000288986 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 H3BUX3 64 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 RAB29O14966 203 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 REG1BP48304 166 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 CCDC144NLQ6NUI1 221 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 DDB2Q92466 427 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 SPIN2AQ99865 258 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 SPIN2BQ9BPZ2 258 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 SLA2Q9H6Q3 261 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 SAA2-SAA4A0A096LPE2 208 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 A0A0G2JRQ6 117 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 L7N2F9 121 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 PITX3O75364 302 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 GAPDHP04406 335 aaKnown RBP12.37□□□□□ -0.43
NCK1-201ENST00000288986 PET100P0DJ07 73 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
NCK1-201ENST00000288986 RPL39P5Q59GN2 51 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
NCK1-201ENST00000288986 OOSP1A8MZH6 123 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 RBFOX2O43251 390 aaKnown RBP eCLIP12.36□□□□□ -0.43
NCK1-201ENST00000288986 RAMP3O60896 148 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 IGKV1-5P01602 117 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 MBPP02686 304 aaPredicted RBP12.36□□□□□ -0.43
NCK1-201ENST00000288986 P0C879 139 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 BRS3P32247 399 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 LPAR6P43657 344 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 LY6EQ16553 131 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 AANATQ16613 207 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 CD300LFQ8TDQ1 290 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 ST6GALNAC6Q969X2 333 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
NCK1-201ENST00000288986 A0A1B0GU03 582 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 TRIM77I1YAP6 450 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 M0R1X1 148 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 DEDDO75618 318 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 OR2F2O95006 317 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 CD24P25063 80 aa12.35□□□□□ -0.43
NCK1-201ENST00000288986 LINC00205P59089 165 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms