RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 COA3Q9Y2R0 106 aaPredicted RBP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SBF1O95248 1867 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 K7ESM1 405 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 DHHO43323 396 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SYNGR3O43761 229 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 PFN1P07737 140 aaKnown RBP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 UBE2D3P61077 147 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 VWC2Q2TAL6 325 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CFHR4Q92496 578 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 FUT9Q9Y231 359 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 K7N7A8 449 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SIGLEC5O15389 551 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ICOSLGO75144 302 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 HBZP02008 142 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CD74P04233 296 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 RPL27P61353 136 aaKnown RBP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 HLA-DRB5Q30154 266 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ZNF664Q8N3J9 261 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 KLHL30-AS1Q8NEE0 82 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 OR11H4Q8NGC9 324 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 R3HDMLQ9H3Y0 253 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ZNF107Q9UII5 783 aaPredicted RBP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 PLXNA1Q9UIW2 1896 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 VCANP13611 3396 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 OTOFQ9HC10 1997 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 TRAV5A0A0B4J249 113 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 IGHV1-69-2A0A0G2JMI3 117 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 WNT1P04628 370 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CBLN1P23435 193 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 LPAR6P43657 344 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CD81P60033 236 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CCL8P80075 99 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 FMODQ06828 376 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ABLIM2Q6H8Q1 611 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 LRTM2Q8N967 370 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ORAOV1Q8WV07 137 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 DNAJC30Q96LL9 226 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 NRIP2Q9BQI9 281 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 KLK15Q9H2R5 256 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 PARLQ9H300 379 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ST3GAL6Q9Y274 331 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 TRAV25A0A0B4J276 109 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 LOC390937A0A1W2PQ73 354 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ZNF253O75346 499 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SCTP09683 121 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 CKS2P33552 79 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 DAPP51397 102 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SLC38A11Q08AI6 406 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ZIC1Q15915 447 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
NCOA1-201ENST00000288599 Q6ZWC4 215 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 OR11H1Q8NG94 326 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 OR11H2Q8NH07 326 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 PRR13Q9NZ81 148 aa3.78□□□□□ -1.8
NCOA1-201ENST00000288599 SLC17A2O00624 439 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 CYB5R3P00387 301 aaPredicted RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RPS27P42677 84 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 CSRP2Q16527 193 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 ZNF506Q5JVG8 444 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 DLK2Q6UY11 383 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 LRRC75AQ8NAA5 344 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 SLC37A2Q8TED4 501 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 WFIKKN1Q96NZ8 548 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RBKSQ9H477 322 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 SLC25A37Q9NYZ2 338 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 ZMIZ1Q9ULJ6 1067 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 IGKV6D-21A0A0A0MT36 114 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 CTSGP08311 255 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 LIMS3P0CW19 117 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 LIMS4P0CW20 117 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 DEFB130BP0DP73 79 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 DEFB130AP0DP74 79 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 HIST1H1CP16403 213 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RPL8P62917 257 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 PITX1P78337 314 aaPredicted RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 SFTA2Q6UW10 78 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 C20orf196Q8IYI0 205 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 OR5A1Q8NGJ0 315 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 OR10G8Q8NGN5 311 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 TMEM45BQ96B21 275 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 ARHGAP5-AS1Q96IT6 56 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 Q9N2K0 584 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RASL12Q9NYN1 266 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 THAP10Q9P2Z0 257 aaPredicted RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 UPK2O00526 184 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 IGKV1D-12P01611 117 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 GPX2P18283 190 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 IER3P46695 156 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 LHX2P50458 406 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 FOXL1Q12952 345 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 SRSF6Q13247 344 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RNF165Q6ZSG1 346 aa3.77□□□□□ -1.81
NCOA1-201ENST00000288599 RNF113BQ8IZP6 322 aaKnown RBP3.77□□□□□ -1.81
NCOA1-201ENST00000288599 PQLC3Q8N755 202 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms