RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 A0A1B0GW64 132 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 TCRBV4S1A1TA0A5B7 111 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 H7C2Y5 167 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 I3L521 148 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 J3QRK9 145 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 FCER2P06734 321 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF735P0CB33 412 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 RRASP10301 218 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 UBE2KP61086 200 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 RPS16P62249 146 aaKnown RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 RUNX1Q01196 453 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 POU2AF1Q16633 256 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 NSUN5P1Q3KNT7 163 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 MZT2AQ6P582 158 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF66Q6ZN08 573 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF818PQ6ZRF7 136 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 LHFPL1Q86WI0 220 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 PUSL1Q8N0Z8 303 aaKnown RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 CADM3Q8N126 398 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF491Q8N8L2 437 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 TEX45Q8NA69 505 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 OR52I2Q8NH67 350 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 OSR1Q8TAX0 266 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 MOB3AQ96BX8 217 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 TSNAXQ99598 290 aaKnown RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 HSD17B10Q99714 261 aaKnown RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 METTL1Q9UBP6 276 aaKnown RBP7.12□□□□□ -1.27
HMGN1-201ENST00000288344 WSB1Q9Y6I7 421 aa7.12□□□□□ -1.27
HMGN1-201ENST00000288344 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
HMGN1-201ENST00000288344 CGB1A6NKQ9 187 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 E7EUB6 86 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF701M0R085 212 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-201ENST00000288344 CTDSPLO15194 276 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 RBFOX2O43251 390 aaKnown RBP eCLIP7.11□□□□□ -1.271e-18■□□□□ 8.3
HMGN1-201ENST00000288344 SLC25A17O43808 307 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 RBMXL2O75526 392 aaKnown RBP7.11□□□□□ -1.27
HMGN1-201ENST00000288344 CA2P00918 260 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 CD74P04233 296 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 SLC6A1P30531 599 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 RAB9AP51151 201 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 MECP2P51608 486 aaKnown RBP7.11□□□□□ -1.27
HMGN1-201ENST00000288344 UCP3P55916 312 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 FHL3Q13643 280 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 PRSS8Q16651 343 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 BEAN1Q3B7T3 259 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 LAX1Q8IWV1 398 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 OR4F17Q8NGA8 305 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 OR4X2Q8NGF9 303 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 AP3S1Q92572 193 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 R3HDM4Q96D70 268 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 OR4F4Q96R69 305 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 GON7Q9BXV9 100 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 MRPS7Q9Y2R9 242 aaKnown RBP7.11□□□□□ -1.27
HMGN1-201ENST00000288344 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
HMGN1-201ENST00000288344 TRAV41A0A0B4J266 112 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 SMIM31A0A1B0GVY4 71 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 G3V4G9 280 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 RAMP3O60896 148 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 PEX14O75381 377 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 PGLYRP1O75594 196 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-201ENST00000288344 CRYZL1O95825 349 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 APOA2P02652 100 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 PMP2P02689 132 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 HLA-DMAP28067 261 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 TNFSF8P32971 234 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 HRH1P35367 487 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 SLC35B1P78383 322 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 SNX29P2Q8IUI4 249 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 LFNGQ8NES3 379 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 UBE2E2Q96LR5 201 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 FAM103A1Q9BTL3 118 aaKnown RBP7.1□□□□□ -1.27
HMGN1-201ENST00000288344 FXYD6Q9H0Q3 95 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 KIAA1456Q9P272 454 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 EXTL2Q9UBQ6 330 aa7.1□□□□□ -1.27
HMGN1-201ENST00000288344 A0A1W2PRX2 142 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 GABARAPH6UMI1 98 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 FCGR3BO75015 233 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-201ENST00000288344 RCVRNP35243 200 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 MYCNOSP40205 109 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 TAS2R46P59540 309 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 ARPC4P59998 168 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 DGCR2P98153 550 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 FXYD3Q14802 87 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 RTL8BQ17RB0 113 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 KCTD9Q7L273 389 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 ZNF695Q8IW36 515 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 TCTEX1D1Q8N7M0 179 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 OR4D10Q8NGI6 311 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 OR6F1Q8NGZ6 308 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 TMEM167AQ8TBQ9 72 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 SECTM1Q8WVN6 248 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 HARBI1Q96MB7 349 aa7.09□□□□□ -1.27
HMGN1-201ENST00000288344 CLCC1Q96S66 551 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms