RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TRGV2A0A075B6R0 118 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 H3BQ15 152 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 CA2P00918 260 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 PDCD1Q15116 288 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 PIGYQ3MUY2 71 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SLC25A53Q5H9E4 307 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SIGIRRQ6IA17 410 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 KCNS1Q96KK3 526 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 KCNK17Q96T54 332 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 MPDZO75970 2070 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 TNRC6CQ9HCJ0 1690 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 ABCA12Q86UK0 2595 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 MEX3AA1L020 520 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 NPIPB9F8W1W9 429 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 NPIPB7O75200 414 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 UPK3AO75631 287 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 PRSS23O95084 383 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 FAM57AQ8TBR7 257 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 ADAT3Q96EY9 351 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SEMA5BQ9P283 1151 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 METRNQ9UJH8 293 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 MIA3Q5JRA6 1907 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 NKX2-8O15522 239 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 LEPROTL1O95214 131 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 MOSP00540 346 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 CD74P04233 296 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBMY1A1P0DJD3 496 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBMY1CP0DJD4 496 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RPS11P62280 158 aaKnown RBP eCLIP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SRSF5Q13243 272 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 DNASE2BQ8WZ79 361 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 HIST1H4GQ99525 98 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SLC50A1Q9BRV3 221 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 ZNF385DQ9H6B1 395 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 C21orf62Q9NYP8 219 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 HLA-DRB1P01911 266 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 C1QL3Q5VWW1 255 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 OTPQ5XKR4 325 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 GTSCR1Q86UQ5 136 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 ABHD12Q8N2K0 398 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 OR8D4Q8NGM9 314 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 KLF14Q8TD94 323 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 MRPL24Q96A35 216 aaKnown RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 FRRS1LQ9P0K9 344 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 TCF19Q9Y242 345 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 GLI3P10071 1580 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 LOC107984156A0A0G2JMH3 177 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 COL5A1-AS1Q5SY13 56 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 CYB5R2Q6BCY4 276 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 HCP5Q6MZN7 132 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 C16orf47Q6ZP98 133 aaPredicted RBP3.5□□□□□ -1.85
SCN3A-201ENST00000283254 HAPLN4Q86UW8 402 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 ARL17AQ8IVW1 177 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 C10orf111Q8N326 155 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 C10orf126Q8N4M7 172 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 SOSTQ9BQB4 213 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 RBKSQ9H477 322 aa3.5□□□□□ -1.85
SCN3A-201ENST00000283254 PSMB11A5LHX3 300 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 AMY1AP04745 511 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 HSPB1P04792 205 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 FCARP24071 287 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 PSG4Q00888 419 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 FAM24BQ8N5W8 94 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 PRSS22Q9GZN4 317 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 DLL3Q9NYJ7 618 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 HS3ST3B1Q9Y662 390 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 ATP5LO75964 103 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 TGFAP01135 160 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 TYMSP04818 313 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 HOXA5P20719 270 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 CNTFRP26992 372 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 ARF6P62330 175 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 LINC00470Q9BZP3 86 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 IFT22Q9H7X7 185 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 JKAMPQ9P055 326 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 FUT9Q9Y231 359 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 A0A1W2PPE3 182 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 DUSP14O95147 198 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 SNRPEP62304 92 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 UBE2V2Q15819 145 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 C1orf100Q5SVJ3 147 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 CYB561D1Q8N8Q1 229 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 TMEM54Q969K7 222 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 ZNF385AQ96PM9 386 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 TNFRSF12AQ9NP84 129 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 RNF114Q9Y508 228 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 PGPA6NDG6 321 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 SMAD7O15105 426 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 SUCLG1P53597 346 aaKnown RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 ST3GAL2Q16842 350 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 PMCHL2Q9BQD1 86 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 C7orf69Q9H7B7 122 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 ZNF703Q9H7S9 590 aaPredicted RBP3.49□□□□□ -1.85
SCN3A-201ENST00000283254 RPRMQ9NS64 109 aa3.49□□□□□ -1.85
SCN3A-201ENST00000283254 DDX60LQ5H9U9 1706 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms