RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGHV1-69-2A0A0G2JMI3 117 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 DVL1O14640 695 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 RAB29O14966 203 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 HPRT1P00492 218 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 DVL1P1P54792 670 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-201ENST00000279247 CR1LQ2VPA4 569 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 GNPNAT1Q96EK6 184 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-201ENST00000279247 CTSZQ9UBR2 303 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 STRAPQ9Y3F4 350 aaKnown RBP14.75□□□□□ -0.05
CAPN1-201ENST00000279247 NDUFB3O43676 98 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 P0C879 139 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 AVPI1Q5T686 147 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 KDF1Q8NAX2 398 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-201ENST00000279247 TMEM140Q9NV12 185 aa14.75□□□□□ -0.05
CAPN1-201ENST00000279247 IFNA10P01566 189 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 TMEM200BQ69YZ2 307 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF383Q8NA42 475 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 RHOVQ96L33 236 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 CRYBG3Q68DQ2 2970 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 SMCO3A2RU48 225 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 FBP1P09467 338 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 DEFA4P12838 97 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 RAB5CP51148 216 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 RAB7AP51149 207 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 CD300LFQ8TDQ1 290 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 HEYLQ9NQ87 328 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-201ENST00000279247 COA4Q9NYJ1 87 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 LAMP3Q9UQV4 416 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 ABCA1O95477 2261 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF729A6NN14 1252 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-201ENST00000279247 NUDT19A8MXV4 375 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 COL8A2P25067 703 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF714Q96N38 554 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 RPRMQ9NS64 109 aa14.74□□□□□ -0.05
CAPN1-201ENST00000279247 MAP1AP78559 2803 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-201ENST00000279247 H7C2Y5 167 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 IGKV1-16P04430 117 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 CD5P06127 495 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 HFEQ30201 348 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 LRRC10Q5BKY1 277 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 NQO2P16083 231 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 ABHD12Q8N2K0 398 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 OR10P1Q8NGE3 313 aa14.73□□□□□ -0.05
CAPN1-201ENST00000279247 RPUSD1Q9UJJ7 312 aaKnown RBP14.73□□□□□ -0.05
CAPN1-201ENST00000279247 PRB1P04280 392 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 DIAPH2-AS1Q14236 149 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF251Q9BRH9 671 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 ZNF462Q96JM2 2506 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 SPG11Q96JI7 2443 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 UMAD1C9J7I0 102 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 FAM90A26D6RGX4 464 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 TRIM77I1YAP6 450 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 DNASE2O00115 360 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-201ENST00000279247 TFF3Q07654 80 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 TMEM14EPQ6UXP3 125 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 OR4S2Q8NH73 311 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 SEC11CQ9BY50 192 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 LINC00312Q9Y6C7 94 aa14.72□□□□□ -0.05
CAPN1-201ENST00000279247 C1QTNF12Q5T7M4 302 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 IQCF2Q8IXL9 164 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 LYPD6BQ8NI32 183 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 AIFM2Q9BRQ8 373 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 B9A039 149 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 PEA15Q15121 130 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 WDR61Q9GZS3 305 aaKnown RBP14.71□□□□□ -0.05
CAPN1-201ENST00000279247 GAL3ST2Q9H3Q3 398 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 RAB9BQ9NP90 201 aa14.71□□□□□ -0.05
CAPN1-201ENST00000279247 ZFP92A6NM28 416 aa14.71□□□□□ -0.06
CAPN1-201ENST00000279247 M0R036 132 aa14.71□□□□□ -0.06
CAPN1-201ENST00000279247 HOXA1P49639 335 aaPredicted RBP14.71□□□□□ -0.06
CAPN1-201ENST00000279247 SPSB3Q6PJ21 355 aa14.71□□□□□ -0.06
CAPN1-201ENST00000279247 RXFP4Q8TDU9 374 aa14.71□□□□□ -0.06
CAPN1-201ENST00000279247 GNG13Q9P2W3 67 aa14.71□□□□□ -0.06
CAPN1-201ENST00000279247 FGF7P21781 194 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 LRRC75BQ2VPJ9 315 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 OR4A47Q6IF82 309 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 SSX7Q7RTT5 188 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 TCTEX1D1Q8N7M0 179 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 ZNF439Q8NDP4 499 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 OR10X1Q8NGY0 326 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 TAF15Q92804 592 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPN1-201ENST00000279247 DAOP14920 347 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 SEBOXQ9HB31 216 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-201ENST00000279247 SLC35D1Q9NTN3 355 aa14.7□□□□□ -0.06
CAPN1-201ENST00000279247 DDB2Q92466 427 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 PBDC1Q9BVG4 233 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 MRPL20Q9BYC9 149 aaKnown RBP14.69□□□□□ -0.06
CAPN1-201ENST00000279247 RRHO14718 337 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 SNAPINO95295 136 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 SNRNP70P08621 437 aaKnown RBP14.69□□□□□ -0.06
CAPN1-201ENST00000279247 CT45A6P0DMU7 189 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 CT45A5P0DMU8 189 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 CT45A7P0DMV0 189 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 GNLYP22749 145 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 RAB2AP61019 212 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 TLE4Q04727 773 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 CLCC1Q96S66 551 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 NAV3Q8IVL0 2385 aa14.69□□□□□ -0.06
CAPN1-201ENST00000279247 USP9XQ93008 2570 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-201ENST00000279247 IGHV3-72A0A0B4J1Y9 119 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms