RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PDCD6O75340 191 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SPAG7O75391 227 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SERPINB7O75635 380 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 EPPINO95925 133 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 COX6A1P12074 109 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 IGLL1P15814 213 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SPRP35270 261 aaPredicted RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 RAB13P51153 203 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 DNAJB13P59910 316 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 CKS1BP61024 79 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 RPS23P62266 143 aaKnown RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 PLPPR5Q32ZL2 321 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SPATA31B1PQ5VZV4 182 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 NANOGP8Q6NSW7 305 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 LPCAT3Q6P1A2 487 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 SBSNQ6UWP8 590 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ZNF620Q6ZNG0 422 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 DNM1P46Q6ZS02 220 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ZNF550Q7Z398 422 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 VN1R4Q7Z5H5 301 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 OSR2Q8N2R0 312 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 OR4K15Q8NH41 348 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 LRRC29Q8WV35 223 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 PSMF1Q92530 271 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 AURKBQ96GD4 344 aaPredicted RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 IMMP1LQ96LU5 166 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ZNF354BQ96LW1 612 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 GPER1Q99527 375 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 RSPO3Q9BXY4 272 aaPredicted RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 EBPLQ9BY08 206 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 OR51I2Q9H344 312 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ZDHHC11Q9H8X9 412 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 NANOGQ9H9S0 305 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ASF1BQ9NVP2 202 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 MRPL27Q9P0M9 148 aaKnown RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 PKIGQ9Y2B9 76 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 YTHDF2Q9Y5A9 579 aaKnown RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
CD44-202ENST00000278385 ANKRD11Q6UB99 2663 aaPredicted RBP3.51□□□□□ -1.85
CD44-202ENST00000278385 IGHV4-4A0A075B6R2 117 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 OR5H1A6NKK0 313 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 FAM183AA6NL82 134 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 FOXI3A8MTJ6 420 aaPredicted RBP3.5□□□□□ -1.85
CD44-202ENST00000278385 C5orf58C9J3I9 102 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 HMGB3O15347 200 aaKnown RBP3.5□□□□□ -1.85
CD44-202ENST00000278385 CHST10O43529 356 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 NDUFS5O43920 106 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 ARL6IP5O75915 188 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 IFNGP01579 166 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 C1QBP02746 253 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 C1QCP02747 245 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 ATP5G1P05496 136 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 UQCRHP07919 91 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 CD1EP15812 388 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 IL1RNP18510 177 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 KLK2P20151 261 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 VDAC1P21796 283 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 IGHV1-2P23083 117 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 PRSS3P35030 304 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 BTCP35070 178 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 VDAC2P45880 294 aaPredicted RBP3.5□□□□□ -1.85
CD44-202ENST00000278385 SELENOTP62341 195 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 SRPXP78539 464 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 CDK5Q00535 292 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 C1DQ13901 141 aaKnown RBP3.5□□□□□ -1.85
CD44-202ENST00000278385 CNPY1Q3B7I2 92 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 GDPGP1Q6ZNW5 385 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 TGIF2LYQ8IUE0 185 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 CTAGE3PQ8IX95 158 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 OR4M1Q8NGD0 313 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 OR9Q1Q8NGQ5 310 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 STAG3L4Q8TBR4 150 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 GHSRQ92847 366 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 FAM3DQ96BQ1 224 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 GALNT14Q96FL9 552 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 OR4K3Q96R72 315 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 VPS25Q9BRG1 176 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 C1orf50Q9BV19 199 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 CCDC32Q9BV29 185 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 ZNF226Q9NYT6 803 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 CLCF1Q9UBD9 225 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 GLS2Q9UI32 602 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 ZNF106Q9H2Y7 1883 aaKnown RBP3.5□□□□□ -1.85
CD44-202ENST00000278385 CHD6Q8TD26 2715 aa3.5□□□□□ -1.85
CD44-202ENST00000278385 ATRXP46100 2492 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 FAM172BPA6NC97 362 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 K7N7A8 449 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 MYL12BO14950 172 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PFDN1O60925 122 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR2A4O95047 310 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 WISP3O95389 354 aaPredicted RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 IFNA10P01566 189 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 IGHG2P01859 326 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 C1QAP02745 245 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 STATHP02808 62 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms