RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 TMEM164Q5U3C3 297 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 PRR27Q6MZM9 219 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 MKXQ8IYA7 352 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
TRIM6-201ENST00000278302 LINC00470Q9BZP3 86 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 GNB4Q9HAV0 340 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 CCL28Q9NRJ3 127 aa6.41□□□□□ -1.38
TRIM6-201ENST00000278302 NEURL1O76050 574 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 C3orf79P0CE67 100 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 NTF3P20783 257 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 ATP5G3P48201 142 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 ZNF90Q03938 601 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 LRRC75BQ2VPJ9 315 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 APOBEC3DQ96AK3 386 aaPredicted RBP6.4□□□□□ -1.38
TRIM6-201ENST00000278302 PINX1Q96BK5 328 aaKnown RBP6.4□□□□□ -1.38
TRIM6-201ENST00000278302 GUCD1Q96NT3 240 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 UHRF2Q96PU4 802 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 WDR61Q9GZS3 305 aaKnown RBP6.4□□□□□ -1.38
TRIM6-201ENST00000278302 IGKV3D-15A0A087WSY6 115 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 DPRXA6NFQ7 191 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 SNURFLB1AK76 121 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 C9orf172C9J069 976 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 SPINK2P20155 84 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 CLDN18P56856 261 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 GNB1P62873 340 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 SRPXP78539 464 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 SERF2P84101 59 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 CEACAM21Q3KPI0 293 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 AMMECR1LQ6DCA0 310 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 TMEM108Q6UXF1 575 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 SFRP2Q96HF1 295 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 TTTY12Q9BZ98 90 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 PSENENQ9NZ42 101 aa6.4□□□□□ -1.38
TRIM6-201ENST00000278302 TRBV20OR9-2A0A075B6H5 130 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 OR5B21A6NL26 309 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 ZNF891A8MT65 544 aaPredicted RBP6.4□□□□□ -1.39
TRIM6-201ENST00000278302 MLNRO43193 412 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 WDR1O75083 606 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 ZNF253O75346 499 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 NGFP01138 241 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 SCTP09683 121 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 KITLGP21583 273 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 ARR3P36575 388 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 YPEL3P61236 119 aaPredicted RBP6.4□□□□□ -1.39
TRIM6-201ENST00000278302 SLC35B1P78383 322 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 FOXL1Q12952 345 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 MRPL49Q13405 166 aaKnown RBP6.4□□□□□ -1.39
TRIM6-201ENST00000278302 C3AR1Q16581 482 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 COLCA1Q6ZS62 124 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 TAF15Q92804 592 aaKnown RBP eCLIP6.4□□□□□ -1.39
TRIM6-201ENST00000278302 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.39
TRIM6-201ENST00000278302 CRIM1Q9NZV1 1036 aa6.4□□□□□ -1.39
TRIM6-201ENST00000278302 CACNA1DQ01668 2161 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 IGLC7A0M8Q6 106 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 SIRPB1O00241 398 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 VENTXO95231 258 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 KRASP01116 189 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 CDC34P49427 236 aaPredicted RBP6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FGF12P61328 243 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 MPV17L2Q567V2 206 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 TMEM251Q8N6I4 163 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 OR10G9Q8NGN4 311 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 SARAFQ96BY9 339 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 HS3ST6Q96QI5 342 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 IL36RNQ9UBH0 155 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 CACNG5Q9UF02 275 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 MDFIC2A0A1B0GVS7 189 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A10PA6NDY2 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A18PA6NE21 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A16PA6NEW6 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A20PA6NIJ5 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A8PA6NJQ4 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A7PA6NKC0 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 ANKRD30BLA7E2S9 258 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A22PA8MWA6 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A12PA8MX19 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A5PA8MXJ8 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A23PA8MXZ1 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 RAB29O14966 203 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A15PP0C7V4 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A13PP0C7W8 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A14PP0C7W9 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FAM90A24PP0C7X0 464 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 ESDP10768 282 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 TCTEX1D1Q8N7M0 179 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 C12orf49Q9H741 205 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 MTCH1Q9NZJ7 389 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 FRYQ5TBA9 3013 aa6.39□□□□□ -1.39
TRIM6-201ENST00000278302 IGHV2-26A0A0B4J1V2 119 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 IGHV1-69-2A0A0G2JMI3 117 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 ZNF503-AS2A6NEH8 195 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 SYNGR1O43759 233 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 SYNGR2O43760 224 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 PSG2P11465 335 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 CD99P14209 185 aa6.38□□□□□ -1.39
TRIM6-201ENST00000278302 UCP1P25874 307 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms