RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 OR1S2Q8NGQ3 325 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 OR13D1Q8NGV5 346 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 OR52E5Q8NH55 327 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 DTD1Q8TEA8 209 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 REG4Q9BYZ8 158 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 NARFLQ9H6Q4 476 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 hCG_1809904A0A1W2PP81 198 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 A0A1W2PPE2 198 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 A0A1W2PR64 198 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 A0A1W2PRV1 198 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 FBXO24O75426 580 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 IL6RP08887 468 aaPredicted RBP17.95■□□□□ 0.46
CCDC7-201ENST00000277657 SEC11BP0C7V7 166 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 SPP1P10451 314 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 DIAPH2-AS1Q14236 149 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 TMEM14EPQ6UXP3 125 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 ZNF429Q86V71 674 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 CIB3Q96Q77 187 aaPredicted RBP17.95■□□□□ 0.46
CCDC7-201ENST00000277657 NABP2Q9BQ15 211 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 PLA2G2EQ9NZK7 142 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 CACFD1Q9UGQ2 172 aa17.95■□□□□ 0.46
CCDC7-201ENST00000277657 LOC105371242A0A075B767 164 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 TRAV3A0A0B4J244 114 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 APOA2P02652 100 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 IL3RAP26951 378 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 SPANXN5Q5MJ07 72 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 BEND2Q8NDZ0 799 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 ZDHHC16Q969W1 377 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 FAM210AQ96ND0 272 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 ATP5SQ99766 215 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 PCGF1Q9BSM1 259 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 CLEC7AQ9BXN2 247 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 PFDN2Q9UHV9 154 aa17.94■□□□□ 0.46
CCDC7-201ENST00000277657 METTL15P1P0C7V9 234 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 REG1BP48304 166 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 SULT1A2P50226 295 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 PRRX1P54821 245 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 DLX1P56177 255 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 SPCS3P61009 180 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 SRSF1Q07955 248 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC7-201ENST00000277657 HAPLN4Q86UW8 402 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 Q8N7P7 452 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 ONECUT1Q9UBC0 465 aa17.93■□□□□ 0.46
CCDC7-201ENST00000277657 MFSD2BA6NFX1 497 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 C15orf61A6NNL5 157 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 ARL16Q0P5N6 197 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 HLA-DRB5Q30154 266 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 OSR1Q8TAX0 266 aaPredicted RBP17.92■□□□□ 0.46
CCDC7-201ENST00000277657 RBMXL1Q96E39 390 aaKnown RBP17.92■□□□□ 0.46
CCDC7-201ENST00000277657 AIFM2Q9BRQ8 373 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 SRRM4A7MD48 611 aaKnown RBP17.92■□□□□ 0.46
CCDC7-201ENST00000277657 CEBPZOSA8MTT3 80 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 M0R1W7 72 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 DFFBO76075 338 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 LY86O95711 162 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 TMEM177Q53S58 311 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 TGIF2LXQ8IUE1 241 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 ZNF525Q8N782 197 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 SAT2Q96F10 170 aaPredicted RBP17.92■□□□□ 0.46
CCDC7-201ENST00000277657 OR4C12Q96R67 309 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 TMEM14BQ9NUH8 114 aa17.92■□□□□ 0.46
CCDC7-201ENST00000277657 FOXA2Q9Y261 457 aaPredicted RBP17.92■□□□□ 0.46
CCDC7-201ENST00000277657 AKAP6Q13023 2319 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 IFNA17P01571 189 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 IGHV2-5P01817 119 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 IGHV4-39P01824 125 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 PDPNQ86YL7 162 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 HSD17B11Q8NBQ5 300 aa17.91■□□□□ 0.46
CCDC7-201ENST00000277657 HBG1P69891 147 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 HBG2P69892 147 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 AANATQ16613 207 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 SH3BGRL3Q9H299 93 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 STRAPQ9Y3F4 350 aaKnown RBP17.9■□□□□ 0.46
CCDC7-201ENST00000277657 TACC2O95359 2948 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 ZNF705EA8MWA4 302 aaPredicted RBP17.9■□□□□ 0.46
CCDC7-201ENST00000277657 BUB1B-PAK6H3BSN5 160 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 H7C2Y5 167 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 SPINK9Q5DT21 86 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 LHX4Q969G2 390 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 BET1LQ9NYM9 111 aa17.9■□□□□ 0.46
CCDC7-201ENST00000277657 TET2Q6N021 2002 aaPredicted RBP17.9■□□□□ 0.46
CCDC7-201ENST00000277657 SHOXO15266 292 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 ARG1P05089 322 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 HSD17B13Q7Z5P4 300 aaPredicted RBP17.89■□□□□ 0.45
CCDC7-201ENST00000277657 EIF4E3Q8N5X7 224 aaKnown RBP17.89■□□□□ 0.45
CCDC7-201ENST00000277657 OR4P4Q8NGL7 312 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 OR4C13Q8NGP0 309 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 MARVELD3Q96A59 401 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 CCL19Q99731 98 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 NUP50Q9UKX7 468 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 TCF19Q9Y242 345 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 WASHC3Q9Y3C0 194 aa17.89■□□□□ 0.45
CCDC7-201ENST00000277657 PMS2P5A8MQ11 134 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 TEX46H3BTG2 121 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 UPK2O00526 184 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 ATP6V0CP27449 155 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 MC5RP33032 325 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 VDAC2P45880 294 aaPredicted RBP17.88■□□□□ 0.45
CCDC7-201ENST00000277657 ARF6P62330 175 aa17.88■□□□□ 0.45
CCDC7-201ENST00000277657 PRB3Q04118 309 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms