RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 BRWD1-AS2P59051 145 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 UBE2KP61086 200 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 RPL30P62888 115 aaKnown RBP6.74□□□□□ -1.33
TPM3-201ENST00000271850 TAGLNQ01995 201 aaKnown RBP6.74□□□□□ -1.33
TPM3-201ENST00000271850 SSX1Q16384 188 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 HES5Q5TA89 166 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 CDPF1Q6NVV7 123 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 DEFB125Q8N687 156 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 SRSF12Q8WXF0 261 aaKnown RBP6.74□□□□□ -1.33
TPM3-201ENST00000271850 UFD1Q92890 307 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 DUSP21Q9H596 190 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 ZNF430Q9H8G1 570 aaPredicted RBP6.74□□□□□ -1.33
TPM3-201ENST00000271850 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 COA4Q9NYJ1 87 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 MGAT4AQ9UM21 535 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 SELENOKQ9Y6D0 94 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 TEX22C9J3V5 150 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 PPP5D1E7EU14 171 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 H0Y980 276 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 OR2A4O95047 310 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 HLA-AP01891 365 aaKnown RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 OR9G9P0C7N8 305 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 SAA1P0DJI8 122 aaPredicted RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 CALRP27797 417 aaKnown RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 CD40LGP29965 261 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 AQP4P55087 323 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 CD81P60033 236 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 RHOGP84095 191 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 EXOSC2Q13868 293 aaKnown RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 RPEL1Q2QD12 228 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
TPM3-201ENST00000271850 Q8N402 240 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 USMG5Q96IX5 58 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 TMEM68Q96MH6 324 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 ZC4H2Q9NQZ6 224 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 CEPT1Q9Y6K0 416 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 HERC2O95714 4834 aa6.73□□□□□ -1.33
TPM3-201ENST00000271850 IGKV1D-13A0A0B4J2D9 117 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 HMX3A6NHT5 357 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 CGB1A6NKQ9 187 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 ANKRD65E5RJM6 399 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 EBAG9O00559 213 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 SHOXO15266 292 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 DENRO43583 198 aaKnown RBP6.72□□□□□ -1.33
TPM3-201ENST00000271850 DIRAS3O95661 229 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 CRYZL1O95825 349 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
TPM3-201ENST00000271850 HSMCR30P0CW71 290 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 IGKV1-13P0DP09 117 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 HIST1H1DP16402 221 aaKnown RBP6.72□□□□□ -1.33
TPM3-201ENST00000271850 AADACP22760 399 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 MLLT11Q13015 90 aaPredicted RBP6.72□□□□□ -1.33
TPM3-201ENST00000271850 TNXAQ16473 311 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 DEFB114Q30KQ6 69 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 LCN12Q6JVE5 192 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 Q6ZS49 121 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 VKORC1L1Q8N0U8 176 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 TEX45Q8NA69 505 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 OR56B1Q8NGI3 324 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 OR10R2Q8NGX6 335 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 CACNG8Q8WXS5 425 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 RAB3CQ96E17 227 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 WDR89Q96FK6 387 aaPredicted RBP6.72□□□□□ -1.33
TPM3-201ENST00000271850 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 NEURL2Q9BR09 285 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 V9GY05 133 aa6.72□□□□□ -1.33
TPM3-201ENST00000271850 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.33
TPM3-201ENST00000271850 A0A075B6Q4 140 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 C2orf70A6NJV1 201 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 J3QRK9 145 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 EIF4EBP3O60516 100 aaPredicted RBP6.71□□□□□ -1.34
TPM3-201ENST00000271850 OR2J3O76001 311 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 IGHV3-23P01764 117 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 MYOD1P15172 320 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 CRHBPP24387 322 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 SERPINB10P48595 397 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 EWSR1Q01844 656 aaKnown RBP eCLIP6.71□□□□□ -1.34
TPM3-201ENST00000271850 GTSCR1Q86UQ5 136 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 TTC9CQ8N5M4 171 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 OR2K2Q8NGT1 345 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 OR10J5Q8NHC4 309 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 GPHA2Q96T91 129 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 PHB2Q99623 299 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 TUBA4BQ9H853 241 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 RAB22AQ9UL26 194 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 S4R3C0 116 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
TPM3-201ENST00000271850 TMEM213A2RRL7 107 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 SMIM30A4D0T7 59 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 FAM223BA6NKX1 122 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 IFITM5A6NNB3 132 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 RGS10O43665 173 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 FCGR3BO75015 233 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 ARL6IP5O75915 188 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 NDUFB8O95169 186 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms