RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 GLRXP35754 106 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 RPS10P46783 165 aaKnown RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 NKX6-1P78426 367 aaPredicted RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 RPP25LQ8N5L8 163 aaKnown RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 Q8WTZ3 238 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 MRPL37Q9BZE1 423 aaKnown RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 CALYQ9NYX4 217 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 UBE2CO00762 179 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 SLC31A2O15432 143 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 IFNA17P01571 189 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 CXCL1P09341 107 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 MEOX2P50222 304 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 FABP9Q0Z7S8 132 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 UTF1Q5T230 341 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 MRGPRGQ86SM5 289 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 Q8TCH9 128 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 TMPRSS5Q9H3S3 457 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 TANC2Q9HCD6 1990 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 NQO2P16083 231 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 CFHR2P36980 270 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 ZNF134P52741 427 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 ELOBQ15370 118 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 DUX4L9Q6RFH8 374 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-201ENST00000266679 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
CPSF6-201ENST00000266679 CENPVQ7Z7K6 275 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-201ENST00000266679 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 OR10G9Q8NGN4 311 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 OR10G7Q8NGN6 311 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 IFI27L2Q9H2X8 130 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 OR6C3Q9NZP0 311 aa10.68□□□□□ -0.7
CPSF6-201ENST00000266679 SPTAN1Q13813 2472 aaKnown RBP10.67□□□□□ -0.7
CPSF6-201ENST00000266679 DSCAMO60469 2012 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 CADP27708 2225 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 TGIF2-C20orf24A0A0A6YYL0 155 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 C15orf62A8K5M9 175 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 F2RL2O00254 374 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 YPEL1O60688 119 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 LOXL3P58215 753 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 FAM27E3Q08E93 113 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 IQCF2Q8IXL9 164 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 YPEL2Q96QA6 119 aa10.67□□□□□ -0.7
CPSF6-201ENST00000266679 TET2Q6N021 2002 aaPredicted RBP10.67□□□□□ -0.7
CPSF6-201ENST00000266679 CTXND1A0A1B0GTU2 59 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 CYB5R3P00387 301 aaPredicted RBP10.66□□□□□ -0.7
CPSF6-201ENST00000266679 HPRT1P00492 218 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 LHBP01229 141 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 CRYABP02511 175 aaKnown RBP10.66□□□□□ -0.7
CPSF6-201ENST00000266679 TIMP3P35625 211 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 ERVFRD-1P60508 538 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 ZNF709Q8N972 641 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 OR4A16Q8NH70 328 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 P2RX4Q99571 388 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 SFXN3Q9BWM7 321 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 SIRT7Q9NRC8 400 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 DSCAML1Q8TD84 2053 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 IGLV3-9A0A075B6K5 115 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 DEFA4P12838 97 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 BMP5P22003 454 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 ERVK-16P61578 105 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 TNFAIP6P98066 277 aaPredicted RBP10.66□□□□□ -0.7
CPSF6-201ENST00000266679 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 CR1LQ2VPA4 569 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 DEFB108BQ8NET1 73 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 GATAD1Q8WUU5 269 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 S1PR3Q99500 378 aa10.66□□□□□ -0.7
CPSF6-201ENST00000266679 TRAV3A0A0B4J244 114 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 MKRN2OSH3BPM6 223 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 IGHV2-5P01817 119 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 MBP02144 154 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 CD81P60033 236 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 GNB2P62879 340 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 C17orf58Q2M2W7 97 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-201ENST00000266679 C1QL4Q86Z23 238 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 FAM57AQ8TBR7 257 aa10.65□□□□□ -0.7
CPSF6-201ENST00000266679 ACTR3CQ9C0K3 210 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-201ENST00000266679 METTL1Q9UBP6 276 aaKnown RBP10.65□□□□□ -0.7
CPSF6-201ENST00000266679 USP9YO00507 2555 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-201ENST00000266679 SMCO3A2RU48 225 aa10.65□□□□□ -0.71
CPSF6-201ENST00000266679 B4DEV8 164 aa10.65□□□□□ -0.71
CPSF6-201ENST00000266679 AP4M1O00189 453 aa10.65□□□□□ -0.71
CPSF6-201ENST00000266679 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.71
CPSF6-201ENST00000266679 KIAA0141Q14154 515 aaPredicted RBP10.65□□□□□ -0.71
CPSF6-201ENST00000266679 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.71
CPSF6-201ENST00000266679 SDF2L1Q9HCN8 221 aa10.65□□□□□ -0.71
CPSF6-201ENST00000266679 RNF7Q9UBF6 113 aa10.65□□□□□ -0.71
CPSF6-201ENST00000266679 CXorf65A6NEN9 183 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 C17orf112F2Z3M2 114 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 CYB5BO43169 146 aa10.64□□□□□ -0.71
CPSF6-201ENST00000266679 IFNA10P01566 189 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms