RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 B3GALNT1O75752 331 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 NXPH3O95157 252 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 VENTXO95231 258 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 IGKV1D-33P01593 117 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 IGKV1-33P01594 117 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 SNRNP70P08621 437 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 AKR1C2P52895 323 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 HES1Q14469 280 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 SPNS3Q6ZMD2 512 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 OR8H3Q8N146 312 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 TCTEX1D1Q8N7M0 179 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 RNASE11Q8TAA1 199 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 CD300LFQ8TDQ1 290 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 FLYWCH2Q96CP2 140 aaKnown RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 MS4A7Q9GZW8 240 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 PLEKHA2Q9HB19 425 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 RANGRFQ9HD47 186 aaPredicted RBP7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 NUP50Q9UKX7 468 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 NSG2Q9Y328 171 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 FAM96BQ9Y3D0 163 aa7.81□□□□□ -1.16
SNRNP40-201ENST00000263694 MARCH11A6NNE9 402 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 RBFOX2O43251 390 aaKnown RBP eCLIP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 TXNL1O43396 289 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 IGLV2-23P01705 113 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 OR9G9P0C7N8 305 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 CD99P14209 185 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 MC5RP33032 325 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 F2RL1P55085 397 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 SRPXP78539 464 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 HABP2Q14520 560 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 DEFB112Q30KQ8 113 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 TMEM177Q53S58 311 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 NMSQ5H8A3 153 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 CCDC144NLQ6NUI1 221 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 DMBX1Q8NFW5 382 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 OR5M8Q8NGP6 311 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 IL22RA2Q969J5 263 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 ST6GAL2Q96JF0 529 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 FYTTD1Q96QD9 318 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 ZNF436Q9C0F3 470 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 GSKIPQ9P0R6 139 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 FAM90A9PA6NNJ1 464 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 OOSP1A8MZH6 123 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 CCNKO75909 580 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 IFNA21P01568 189 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 P0C879 139 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 SAA1P0DJI8 122 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 RRASP10301 218 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 MYOD1P15172 320 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 NQO2P16083 231 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 HLA-GP17693 338 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 CD1BP29016 333 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 IAH1Q2TAA2 248 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 Q5BKY6 102 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 GSG1LQ6UXU4 331 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 PDPNQ86YL7 162 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 OR4C13Q8NGP0 309 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 PIFOQ8TCI5 191 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 RRNAD1Q96FB5 475 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 RHOVQ96L33 236 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 ZNF48Q96MX3 618 aaPredicted RBP7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 SSX3Q99909 188 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 PDCD10Q9BUL8 212 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 MEGF9Q9H1U4 602 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 TPSG1Q9NRR2 321 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 TMED3Q9Y3Q3 217 aa7.8□□□□□ -1.16
SNRNP40-201ENST00000263694 F8P00451 2351 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 SLC25A17O43808 307 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 VDAC1P21796 283 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 OR2B8PP59922 312 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 PJVKQ0ZLH3 352 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 LY6EQ16553 131 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 DHRS7BQ6IAN0 325 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 OR4A47Q6IF82 309 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 C11orf87Q6NUJ2 197 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 CLEC9AQ6UXN8 241 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 AKAP14Q86UN6 197 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 TMEM219Q86XT9 240 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 OSR1Q8TAX0 266 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 CLCC1Q96S66 551 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 RANBP3Q9H6Z4 567 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 COMMD9Q9P000 198 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 CACNG5Q9UF02 275 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 MMP24Q9Y5R2 645 aa7.79□□□□□ -1.16
SNRNP40-201ENST00000263694 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
SNRNP40-201ENST00000263694 H3BUX3 64 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms