RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DLX6P56179 175 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 RPL8P62917 257 aaKnown RBP10.31□□□□□ -0.76
SMG6-201ENST00000263073 DCAF10Q5QP82 559 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 ZCCHC14Q8WYQ9 949 aaKnown RBP10.31□□□□□ -0.76
SMG6-201ENST00000263073 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 A8MXK9 166 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 GDF9O60383 454 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 ANOS1P23352 680 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 ZNF441Q8N8Z8 693 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 APOBEC4Q8WW27 367 aaKnown RBP10.31□□□□□ -0.76
SMG6-201ENST00000263073 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 SPAARA0A1B0GVQ0 90 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 NFAM1Q8NET5 270 aaPredicted RBP10.31□□□□□ -0.76
SMG6-201ENST00000263073 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 RNF222A6NCQ9 220 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 CX3CL1P78423 397 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 PMS2CLQ68D20 193 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 INO80CQ6PI98 192 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 RCC1LQ96I51 464 aaKnown RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 IGHV3OR16-8A0A075B7F1 116 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 IGHV1-45A0A0A0MS14 117 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 SPSB4Q96A44 273 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 NABP2Q9BQ15 211 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 SOX21Q9Y651 276 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 MDC1Q14676 2089 aaKnown RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 A0A0G2JK05 382 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 GCHFRP30047 84 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 CD8AP01732 235 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 ZNF430Q9H8G1 570 aaPredicted RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 TMEM238LA0A1B0GVL6 79 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 A6NJY4 79 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 LGALS3P17931 250 aaKnown RBP10.3□□□□□ -0.76
SMG6-201ENST00000263073 RIPPLY3P57055 190 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 DYNLRB2Q8TF09 96 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 NPIPB3Q92617 1050 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 CDC42EP3Q9UKI2 254 aa10.3□□□□□ -0.76
SMG6-201ENST00000263073 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 CA11O75493 328 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 BTCP35070 178 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
SMG6-201ENST00000263073 SCNM1Q9BWG6 230 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 RP1P56715 2156 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 C8orf88P0DMB2 117 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 ATP1A1-AS1Q5TC04 95 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 OR10AG1Q8NH19 301 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 NPIPB7O75200 414 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 TSPAN13O95857 204 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 MGST3O14880 152 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
SMG6-201ENST00000263073 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 ASCL5Q7RTU5 278 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 PHLDA3Q9Y5J5 127 aa10.29□□□□□ -0.76
SMG6-201ENST00000263073 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 FOXC2Q99958 501 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 FOXI3A8MTJ6 420 aaPredicted RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 NPCDR1Q9BY65 106 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 HEXA-AS1Q9H8Q6 139 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 SBF2Q86WG5 1849 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 PRF1P14222 555 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 LCN2P80188 198 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 RELQ04864 619 aaPredicted RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 ZNRF1Q8ND25 227 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 GATAD1Q8WUU5 269 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 SSBP4Q9BWG4 385 aaPredicted RBP10.28□□□□□ -0.76
SMG6-201ENST00000263073 TCF19Q9Y242 345 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 MPDU1O75352 247 aa10.28□□□□□ -0.76
SMG6-201ENST00000263073 A1L4Q6 167 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 TFF1P04155 84 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 FAM201AQ5SY85 155 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 WDR54Q9H977 334 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 C1RLQ9NZP8 487 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 ERGP11308 486 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 IGFBP2P18065 325 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 METTL26Q96S19 204 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 PRDM14Q9GZV8 571 aa10.27□□□□□ -0.76
SMG6-201ENST00000263073 ODAMA1E959 279 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 C16orf97H3BN30 126 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 PF4V1P10720 104 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 C19orf54Q5BKX5 351 aa10.27□□□□□ -0.77
SMG6-201ENST00000263073 CDCP2Q5VXM1 449 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms