RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TAS2R31P59538 309 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 UBE2KP61086 200 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 TMED4Q7Z7H5 227 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 SGPP2Q8IWX5 399 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 RHOVQ96L33 236 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 FLVCR2Q9UPI3 526 aa13.19□□□□□ -0.3
CHCHD3-201ENST00000262570 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 TCRBP04435 133 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 SAA1P0DJI8 122 aaPredicted RBP13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 NQO2P16083 231 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 DEFA1P59665 94 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 DEFA3P59666 94 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 SUPT4H1P63272 117 aaKnown RBP13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 DHODHQ02127 395 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 SP6Q3SY56 376 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 VMA21Q3ZAQ7 101 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 TMEM128Q5BJH2 165 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 LIN54Q6MZP7 749 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 SLC25A42Q86VD7 318 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 VKORC1L1Q8N0U8 176 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 TEX45Q8NA69 505 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 GLYATL2Q8WU03 294 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 AIFM2Q9BRQ8 373 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 C16orf95Q9H693 158 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 COMMD9Q9P000 198 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 KCNIP3Q9Y2W7 256 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 SIGLEC9Q9Y336 463 aa13.18□□□□□ -0.3
CHCHD3-201ENST00000262570 FCN1O00602 326 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 IGKV1-39P01597 117 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 IGKV1D-39P04432 117 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 SERPINE2P07093 398 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 OR5AC1P0C628 307 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 RPA2P15927 270 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 UCP1P25874 307 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 RAG2P55895 527 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 PLGLAQ15195 96 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 TMEM222Q9H0R3 208 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 PALMDQ9NP74 551 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
CHCHD3-201ENST00000262570 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 IGHG2P01859 326 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 C9orf152Q5JTZ5 239 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 PUSL1Q8N0Z8 303 aaKnown RBP13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 OR4F5Q8NH21 305 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 C20orf85Q9H1P6 137 aa13.16□□□□□ -0.3
CHCHD3-201ENST00000262570 TMEM89A2RUT3 159 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 OR2A4O95047 310 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 CDS2O95674 445 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 KRASP01116 189 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 SSX9Q7RTT3 188 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 NRARPQ7Z6K4 114 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 DUSP18Q8NEJ0 188 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 OR2T6Q8NHC8 308 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 ENKURQ8TC29 256 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 SEC22AQ96IW7 307 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 OR2A7Q96R45 310 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 HSPB9Q9BQS6 159 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 C19orf24Q9BVV8 132 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 PJVKQ0ZLH3 352 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 TMEM187Q14656 261 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 CADM3Q8N126 398 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 CLCC1Q96S66 551 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
CHCHD3-201ENST00000262570 COL6A5A8TX70 2615 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 KBTBD11O94819 623 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 CA2P00918 260 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 G6PCP35575 357 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 ERVK-16P61578 105 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 CX3CL1P78423 397 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 FOXL1Q12952 345 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 SLC35E3Q7Z769 313 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 DMBX1Q8NFW5 382 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM56Q96MV1 263 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms