RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 VSTM2AQ8TAG5 236 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 FYTTD1Q96QD9 318 aaKnown RBP9.35□□□□□ -0.91
TRAF4-202ENST00000262396 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 KCNK7Q9Y2U2 307 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 RYR3Q15413 4870 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 TRDV1A0A1B0GX56 115 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 SHISA3A0PJX4 238 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 RAB27BO00194 218 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 OR2J3O76001 311 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 SAA1P0DJI8 122 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-202ENST00000262396 DEFA4P12838 97 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 NFYAP23511 347 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-202ENST00000262396 PSMB9P28065 219 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 HAGHQ16775 308 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 ADAD2Q8NCV1 583 aaKnown RBP9.34□□□□□ -0.91
TRAF4-202ENST00000262396 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 NRG4Q8WWG1 115 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
TRAF4-202ENST00000262396 ZNF430Q9H8G1 570 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-202ENST00000262396 PLEKHA3Q9HB20 300 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 AKIP1Q9NQ31 210 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 ADAM30Q9UKF2 790 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 SPATA2Q9UM82 520 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 OR2W1Q9Y3N9 320 aa9.34□□□□□ -0.91
TRAF4-202ENST00000262396 ZNF320A2RRD8 509 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 LINC00473A8K010 186 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 A8MZ25 164 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 BRI3O95415 125 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 CSN3P07498 182 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
TRAF4-202ENST00000262396 SSX1Q16384 188 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 HACD4Q5VWC8 232 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 OR2A7Q96R45 310 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
TRAF4-202ENST00000262396 NEURL2Q9BR09 285 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 OR51E2Q9H255 320 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 DCSTAMPQ9H295 470 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 NDUFB11Q9NX14 153 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 DAPK2Q9UIK4 370 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 FBXL7Q9UJT9 491 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 SSR3Q9UNL2 185 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 RBMX2Q9Y388 322 aaKnown RBP9.33□□□□□ -0.92
TRAF4-202ENST00000262396 CEPT1Q9Y6K0 416 aa9.33□□□□□ -0.92
TRAF4-202ENST00000262396 NOTOA8MTQ0 251 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 GGCTO75223 188 aaKnown RBP9.32□□□□□ -0.92
TRAF4-202ENST00000262396 JTBO76095 146 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 HRASP01112 189 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 SSBP2P81877 361 aaPredicted RBP9.32□□□□□ -0.92
TRAF4-202ENST00000262396 C15orf32Q32M92 178 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 CNIH2Q6PI25 160 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 Q6ZS49 121 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 SSX9Q7RTT3 188 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 SLC16A13Q7RTY0 426 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 VKORC1L1Q8N0U8 176 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 NUDCD2Q8WVJ2 157 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 C5orf30Q96GV9 206 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 Q9H521 79 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 HRASLSQ9HDD0 168 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 TAS2R8Q9NYW2 309 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 ZNF257Q9Y2Q1 563 aa9.32□□□□□ -0.92
TRAF4-202ENST00000262396 RRP15Q9Y3B9 282 aaKnown RBP9.32□□□□□ -0.92
TRAF4-202ENST00000262396 TMEM235A6NFC5 223 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 HMX3A6NHT5 357 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 BMPR1BO00238 502 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 CYB5BO43169 146 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 GALP22466 123 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 ARL3P36405 182 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 KIR2DS2P43631 304 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 CD300EQ496F6 205 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-202ENST00000262396 FAM106AQ4KMX7 169 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 IL34Q6ZMJ4 242 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 SECTM1Q8WVN6 248 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 DDB2Q92466 427 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 EEF1AKMT3Q96AZ1 226 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 ELF5Q9UKW6 265 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-202ENST00000262396 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
TRAF4-202ENST00000262396 IGKV1D-8A0A087WSZ0 117 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.3□□□□□ -0.92
TRAF4-202ENST00000262396 LCE6AA0A183 80 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 IZUMO1RA6ND01 250 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 PPP5D1E7EU14 171 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 TNFSF12O43508 249 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 OR2C1O95371 312 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 IGHV3-23P01764 117 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 HLA-DQB1P01920 261 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 HIST1H1BP16401 226 aaKnown RBP9.3□□□□□ -0.92
TRAF4-202ENST00000262396 MAS1LP35410 378 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 CLEC19AQ6UXS0 136 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 ADAMTSL5Q6ZMM2 481 aa9.3□□□□□ -0.92
TRAF4-202ENST00000262396 TPRA1Q86W33 373 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms