RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CD46P15529 392 aa16.11■□□□□ 0.17
SCARB1-201ENST00000261693 FABP6P51161 128 aa16.11■□□□□ 0.17
SCARB1-201ENST00000261693 WDR82Q6UXN9 313 aa16.11■□□□□ 0.17
SCARB1-201ENST00000261693 COL8A2P25067 703 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 GCGP01275 180 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 OR4A8P0C604 315 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 CNN1P51911 297 aaKnown RBP16.1■□□□□ 0.17
SCARB1-201ENST00000261693 CNEP1R1Q8N9A8 125 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 TMEM18Q96B42 140 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 WDR83OSQ9Y284 106 aa16.1■□□□□ 0.17
SCARB1-201ENST00000261693 ICE1Q9Y2F5 2266 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 TIMM8AO60220 97 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-201ENST00000261693 SOX15O60248 233 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 TYMSP04818 313 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 SSX2Q16385 188 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 GMPPAQ96IJ6 420 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-201ENST00000261693 HSD17B10Q99714 261 aaKnown RBP16.09■□□□□ 0.17
SCARB1-201ENST00000261693 TRAPPC1Q9Y5R8 145 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 CADP27708 2225 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-201ENST00000261693 RRHO14718 337 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 PDE6DO43924 150 aa16.09■□□□□ 0.17
SCARB1-201ENST00000261693 RBFOX2O43251 390 aaKnown RBP eCLIP16.08■□□□□ 0.173e-8■■■■■ 62.6
SCARB1-201ENST00000261693 PROP1O75360 226 aa16.08■□□□□ 0.17
SCARB1-201ENST00000261693 WISP2O76076 250 aa16.08■□□□□ 0.17
SCARB1-201ENST00000261693 ARL14EPLP0DKL9 152 aa16.08■□□□□ 0.17
SCARB1-201ENST00000261693 GPR12P47775 334 aa16.08■□□□□ 0.17
SCARB1-201ENST00000261693 TCF23Q7RTU1 214 aa16.08■□□□□ 0.17
SCARB1-201ENST00000261693 BOD1L1Q8NFC6 3051 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 SSTP61278 116 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 PRAMEF5Q5TYX0 476 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 TMEM256Q8N2U0 113 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 CXXC4Q9H2H0 198 aa16.08■□□□□ 0.16
SCARB1-201ENST00000261693 TRBV20OR9-2A0A075B6H5 130 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 TAS2R60P59551 318 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 MIC13Q5XKP0 118 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 SGMS2Q8NHU3 365 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 NOL4LQ96MY1 436 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-201ENST00000261693 TRIB1Q96RU8 372 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 PRO3102Q9H379 93 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 HEYLQ9NQ87 328 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-201ENST00000261693 LNP1A1A4G5 178 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 DUTP33316 252 aaKnown RBP16.07■□□□□ 0.16
SCARB1-201ENST00000261693 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
SCARB1-201ENST00000261693 TREML4Q6UXN2 200 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 DBX2Q6ZNG2 339 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 GBGT1Q8N5D6 347 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 CD177Q8N6Q3 437 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 Q8TCH9 128 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 GNG12Q9UBI6 72 aa16.07■□□□□ 0.16
SCARB1-201ENST00000261693 INTS1Q8N201 2190 aaKnown RBP16.07■□□□□ 0.16
SCARB1-201ENST00000261693 TRAV3A0A0B4J244 114 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 SPINT2O43291 252 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 NUPR1O60356 82 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 PAX5Q02548 391 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 RPL39P5Q59GN2 51 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 ABHD12Q8N2K0 398 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 OR4A16Q8NH70 328 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 LURAP1Q96LR2 239 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 NDUFAF3Q9BU61 184 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 KCNIP2Q9NS61 270 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 C15orf65H3BRN8 121 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 SCGB1D1O95968 90 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 GCH1P30793 250 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 LCN2P80188 198 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 PDLIM3Q53GG5 364 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-201ENST00000261693 SSMEM1Q8WWF3 244 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 SFRP2Q96HF1 295 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 MS4A5Q9H3V2 200 aa16.06■□□□□ 0.16
SCARB1-201ENST00000261693 M0R1X1 148 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 SMIM21Q3B7S5 101 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 INO80CQ6PI98 192 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-201ENST00000261693 TCTEX1D1Q8N7M0 179 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 FER1L6-AS2Q96M78 137 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 MGST2Q99735 147 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 SCO2A0A1W2PP80 73 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 AQP7O14520 342 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 TMPRSS2O15393 492 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 TNFSF15O95150 251 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 THBS3P49746 956 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 TMEM144Q7Z5S9 345 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 PRR7Q8TB68 274 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 LRRC29Q8WV35 223 aa16.05■□□□□ 0.16
SCARB1-201ENST00000261693 F6UZH7 168 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 DHRS13Q6UX07 377 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 PXMP4Q9Y6I8 212 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 HOXC12P31275 282 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 Q6ZT83 130 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 C2orf88Q9BSF0 95 aa16.04■□□□□ 0.16
SCARB1-201ENST00000261693 GRIFINA4D1Z8 144 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 VWA1Q6PCB0 445 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 TEX38Q6PEX7 206 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 FAM214BQ7L5A3 538 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 TGIF2LXQ8IUE1 241 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 RAB1CQ92928 201 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 MDFIC2A0A1B0GVS7 189 aa16.03■□□□□ 0.16
SCARB1-201ENST00000261693 EREGO14944 169 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms