RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 MRPL13Q9BYD1 178 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MRPS18BQ9Y676 258 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 A0A1B0GW64 132 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 APCSP02743 223 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 DANCRP0C864 163 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 IGFBP3P17936 291 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ASIPP42127 132 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 GNG10P50151 68 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 JOSD1Q15040 202 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF79Q15937 498 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 AMMECR1LQ6DCA0 310 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MRGPRFQ96AM1 343 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TIMP4Q99727 224 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TUBA4BQ9H853 241 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ATRXP46100 2492 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MTURNQ8N3F0 131 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 ABCA1O95477 2261 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TWIST1Q15672 202 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 FAM78BQ5VT40 261 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MEGF10Q96KG7 1140 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 M0R1W7 72 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM255AQ5JRV8 349 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 GLRX5Q86SX6 157 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 LRRC75AQ8NAA5 344 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 MKI67P46013 3256 aaKnown RBP3.69□□□□□ -1.82
VPS13C-202ENST00000261517 RD3LP0DJH9 198 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 SFRP2Q96HF1 295 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 PEMTQ9UBM1 199 aa3.69□□□□□ -1.82
VPS13C-202ENST00000261517 NKX2-6A6NCS4 301 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 C3orf80F5H4A9 247 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 UPK2O00526 184 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PPBPP02775 128 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 IL11P20809 199 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 FCER1GP30273 86 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SPOCK3Q9BQ16 436 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 NIT2Q9NQR4 276 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 KLK13Q9UKR3 277 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TBL2Q9Y4P3 447 aaKnown RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PPIAL4CA0A0B4J2A2 164 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PLA2G10O15496 165 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ADRA2AP08913 450 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PPIAL4GP0DN37 164 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 CACNG7P62955 275 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM116Q8NCL8 245 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 AMY1AP04745 511 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 COX6CP09669 75 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SPSB3Q6PJ21 355 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 LHFPL5Q8TAF8 219 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 NPFFR1Q9GZQ6 430 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 CCL28Q9NRJ3 127 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ETV2O00321 342 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PI3P19957 117 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 LEMD1Q68G75 181 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TCF23Q7RTU1 214 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 FAM221AA4D161 298 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 MPTX1A8MV57 137 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 CD40P25942 277 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PTTG1IPP53801 180 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 OR2B11Q5JQS5 317 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ZNF600Q6ZNG1 722 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM252Q8N6L7 170 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 OR5AU1Q8NGC0 362 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TRAV1-1A0A0B4J248 108 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PPOXP50336 477 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 NANOS3P60323 173 aaKnown RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PEAR1Q5VY43 1037 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SLC16A13Q7RTY0 426 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 FAM89BQ8N5H3 189 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 NACAE9PAV3 2078 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM11P17152 192 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SSX7Q7RTT5 188 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM52Q8NDY8 209 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 CLDND2Q8NHS1 167 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM140Q9NV12 185 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 DOCK11Q5JSL3 2073 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM189A5PLL7 270 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 H3BQ15 152 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ZIC3O60481 467 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 FHITP49789 147 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM187Q14656 261 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ALKBH7Q9BT30 221 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SLC25A22Q9H936 323 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PLSCR4Q9NRQ2 329 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 A0A0B4J293 547 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PRR19A6NJB7 356 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 DUSP14O95147 198 aaKnown RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 LHX2P50458 406 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 C1QL3Q5VWW1 255 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ZAR1Q86SH2 424 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TNFRSF19Q9NS68 423 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 TMEM106BQ9NUM4 274 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 URGCP-MRPS24S4R325 110 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ANKHD1Q8IWZ3 2542 aaKnown RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 IGHV2OR16-5A0A0B4J2B6 119 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 ATP5LO75964 103 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 PSG2P11465 335 aa3.68□□□□□ -1.82
VPS13C-202ENST00000261517 SELENOHQ8IZQ5 122 aaKnown RBP3.68□□□□□ -1.82
VPS13C-202ENST00000261517 MYO9AB2RTY4 2548 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms