RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 IL3RAP26951 378 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 SOX8P57073 446 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 RPL39P5Q59GN2 51 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 TGIF2LXQ8IUE1 241 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 FAM103A1Q9BTL3 118 aaKnown RBP13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 PLCE1Q9P212 2302 aa13.54□□□□□ -0.24
SNCAIP-202ENST00000261368 IGHV1-2P23083 117 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 TOMM20LQ6UXN7 152 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 S1PR3Q99500 378 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 DDA1Q9BW61 102 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 AQP7O14520 342 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 RPP30P78346 268 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 IQCJQ1A5X6 159 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 SPRR3Q9UBC9 169 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 RIF1Q5UIP0 2472 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 OR9G9P0C7N8 305 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 SLC35B1P78383 322 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 OR6C3Q9NZP0 311 aa13.53□□□□□ -0.24
SNCAIP-202ENST00000261368 OR4A8P0C604 315 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 HTD2P86397 168 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 TMEM256Q8N2U0 113 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 TMEM178AQ8NBL3 297 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 ZBTB34Q8NCN2 500 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 PXMP4Q9Y6I8 212 aa13.52□□□□□ -0.24
SNCAIP-202ENST00000261368 SLC17A3O00476 420 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 RAB29O14966 203 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 ZNF146Q15072 292 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 COQ2Q96H96 371 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 CXXC4Q9H2H0 198 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 PLEKHA3Q9HB20 300 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 TNCP24821 2201 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 SLC31A2O15432 143 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 GNB1P62873 340 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.25
SNCAIP-202ENST00000261368 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 CBLN1P23435 193 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 HSD17B10Q99714 261 aaKnown RBP13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 MBNL3Q9NUK0 354 aaKnown RBP13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 RRHO14718 337 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 CD82P27701 267 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 GNG10P50151 68 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 NPIPB11E5RHQ5 1161 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 TCAPO15273 167 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 SPRY3O43610 288 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 TCL1AP56279 114 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 RAB31Q13636 194 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 CISD2Q8N5K1 135 aaKnown RBP13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 ZNRF1Q8ND25 227 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 OR10G8Q8NGN5 311 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 C5orf30Q96GV9 206 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 ACY3Q96HD9 319 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 WIPI2Q9Y4P8 454 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
SNCAIP-202ENST00000261368 INTS1Q8N201 2190 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 MLNRO43193 412 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 ERVFC1-1P60608 527 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 ACP7Q6ZNF0 438 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 A8MXE2 369 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 PDE6DO43924 150 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 MGST1P10620 155 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 ACP1P24666 158 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 PRDX2P32119 198 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 FOXF2Q12947 444 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 LINC01551Q86U37 167 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 TGIF2LYQ8IUE0 185 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 DMRTC2Q8IXT2 367 aaPredicted RBP13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 MS4A5Q9H3V2 200 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 FAM201AQ5SY85 155 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 VWA1Q6PCB0 445 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 Q6ZR03 302 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 CMTM2Q8TAZ6 248 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 TBX15Q96SF7 602 aa13.5□□□□□ -0.25
SNCAIP-202ENST00000261368 TRAV3A0A0B4J244 114 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 OR7C2O60412 319 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 NPPCP23582 126 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 SSTP61278 116 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 OR5R1Q8NH85 324 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 PPP1R35Q8TAP8 253 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 LNP1A1A4G5 178 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 FCN1O00602 326 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 GCGP01275 180 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 COL8A2P25067 703 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 IER3P46695 156 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 ERVK11-1P61568 191 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 LYG1Q8N1E2 194 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 SFRP2Q96HF1 295 aa13.49□□□□□ -0.25
SNCAIP-202ENST00000261368 ZNF83P51522 516 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms