RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MDFIC2A0A1B0GVS7 189 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 SIAH2O43255 324 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 OR5I1Q13606 314 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 DEFB109BQ30KR1 87 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 IGFL3Q6UXB1 125 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 C20orf204Q6ZNR8 217 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 BATF2Q8N1L9 274 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 DTD1Q8TEA8 209 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 NPCDR1Q9BY65 106 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 PLSCR4Q9NRQ2 329 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 WIPI2Q9Y4P8 454 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 A0A1B0GUS0 222 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 IGKV3-15P01624 115 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 CRISP2P16562 243 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 KITLGP21583 273 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 RAB7AP51149 207 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 C21orf62-AS1Q17RA5 79 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 FGFRL1Q8N441 504 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 HSPB9Q9BQS6 159 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 DLL3Q9NYJ7 618 aa9.03□□□□□ -0.96
CHRNA1-201ENST00000261007 TRBV9A0A0B4J1U6 114 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 LYZL6O75951 148 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 LINC00310P59036 64 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 ERVK11-1P61568 191 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 TDRG1Q3Y452 100 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 GCNT2Q8N0V5 402 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 ZBTB34Q8NCN2 500 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 OR5T1Q8NG75 326 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 SLC25A40Q8TBP6 338 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 SLC35E1Q96K37 410 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 CIB3Q96Q77 187 aaPredicted RBP9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 RNF2Q99496 336 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 PATZ1Q9HBE1 687 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 IL36RNQ9UBH0 155 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 PROCRQ9UNN8 238 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 PPP1R3CQ9UQK1 317 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
CHRNA1-201ENST00000261007 PTPRBP23467 1997 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MED12LQ86YW9 2145 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 TRAV24A0A0B4J272 114 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 HSPB6O14558 160 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 SH2D1BO14796 132 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 NDUFB4O95168 129 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 C1QTNF9P0C862 333 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 P0C879 139 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 WT1P19544 449 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 CHRNB4P30926 498 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 COMPP49747 757 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 SRSF6Q13247 344 aaKnown RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 ZNF146Q15072 292 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 Q6P435 159 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 C11orf42Q8N5U0 333 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 C9orf106Q8NAJ2 232 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 OR10G8Q8NGN5 311 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 RDH5Q92781 318 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 OR1A1Q9P1Q5 309 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 TRAV39A0A0B4J263 110 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MBD3L4A6NDZ8 208 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MBD3L3A6NE82 208 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MBD3L5A6NJ08 208 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 SERF1AO75920 110 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 TIMP3P35625 211 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 CTRLP40313 264 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 TLE1Q04724 770 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 SPATA46Q5T0L3 261 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 SCCPDHQ8NBX0 429 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MBD3L2Q8NHZ7 208 aaPredicted RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
CHRNA1-201ENST00000261007 WDR87Q6ZQQ6 2873 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 GRIFINA4D1Z8 144 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 RBFOX2O43251 390 aaKnown RBP eCLIP9□□□□□ -0.97
CHRNA1-201ENST00000261007 TCF21O43680 179 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 NXPH2O95156 264 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 IGLV1-44P01699 117 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 REG1AP05451 166 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 CELA3BP08861 270 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 ZNF16P17020 682 aaPredicted RBP9□□□□□ -0.97
CHRNA1-201ENST00000261007 CDKN1AP38936 164 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 NBL1P41271 181 aa9□□□□□ -0.97
CHRNA1-201ENST00000261007 TFF3Q07654 80 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms