RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 EGLN1Q9GZT9 426 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 IFI27L2Q9H2X8 130 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 GFOD1Q9NXC2 390 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
CLUHP3-201ENST00000254109 C17orf100A8MU93 164 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 CD55P08174 381 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 LINC00205P59089 165 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 HAGHQ16775 308 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 C17orf58Q2M2W7 97 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 PRAMEF5Q5TYX0 476 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 TEX36Q5VZQ5 186 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 ZCCHC24Q8N2G6 241 aaKnown RBP9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 OR4A16Q8NH70 328 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 GAFA1Q96PS6 74 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 TMEM147Q9BVK8 224 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 MLXQ9UH92 298 aa9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.91
CLUHP3-201ENST00000254109 CACNA1DQ01668 2161 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ARFGEF3Q5TH69 2177 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF729A6NN14 1252 aaPredicted RBP9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 IFNA17P01571 189 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 IGHV3-7P01780 117 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 SELLP14151 372 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF134P52741 427 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 CCL8P80075 99 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 FLI1Q01543 452 aaPredicted RBP9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 RHEBQ15382 184 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 HFEQ30201 348 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 AWAT1Q58HT5 328 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 KIAA2026Q5HYC2 2103 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF506Q5JVG8 444 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF788Q6ZQV5 615 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 MUC15Q8N387 334 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 RPRMQ9NS64 109 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 LRBAP50851 2863 aa9.39□□□□□ -0.91
CLUHP3-201ENST00000254109 TRAV38-1A0A0B4J264 116 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 hADV38S2A0JD32 116 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 C7orf77A4D0Y5 90 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 PROP1O75360 226 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 HSPB1P04792 205 aaKnown RBP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 COX6B1P14854 86 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 NQO2P16083 231 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 THBS3P49746 956 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 SPCS3P61009 180 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 KHDC3LQ587J8 217 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF787Q6DD87 383 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 C1orf87Q8N0U7 546 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 OR4S2Q8NH73 311 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 CLDND2Q8NHS1 167 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 MBD3L1Q8WWY6 194 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 CORO2AQ92828 525 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 UBTD1Q9HAC8 227 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 MBP02144 154 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 SOD3P08294 240 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 OR9G9P0C7N8 305 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 OR2B8PP59922 312 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 GNB2P62879 340 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 ICAM4Q14773 271 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 CT45A1Q5HYN5 189 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 HIST2H2BCQ6DN03 193 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 DUX4L9Q6RFH8 374 aaPredicted RBP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 SSX9Q7RTT3 188 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 FAM216BQ8N7L0 139 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF709Q8N972 641 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 OR52E5Q8NH55 327 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 CT45A3Q8NHU0 189 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 RXFP4Q8TDU9 374 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 LEAP2Q969E1 77 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 PUS1Q9Y606 427 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLUHP3-201ENST00000254109 USP9YO00507 2555 aaPredicted RBP9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 RAI1Q7Z5J4 1906 aaPredicted RBP9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 PMS2P5A8MQ11 134 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 TMPRSS2O15393 492 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 SLC31A2O15432 143 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 NDUFB7P17568 137 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 FGF7P21781 194 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 PAX6P26367 422 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 CEBPGP53567 150 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 ELLP55199 621 aaPredicted RBP9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 MRPS11P82912 194 aaKnown RBP9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 EFNB3Q15768 340 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 AARDQ4LEZ3 155 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 SPINK9Q5DT21 86 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms