RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MYOD1P15172 320 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 PMS2CLQ68D20 193 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 SGK494Q96LW2 274 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
USHBP1-201ENST00000252597 ABI3Q9P2A4 366 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 TP53TG5Q9Y2B4 290 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 CD1BP29016 333 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 MAS1LP35410 378 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 MRPL49Q13405 166 aaKnown RBP10.04□□□□□ -0.8
USHBP1-201ENST00000252597 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 OR4P4Q8NGL7 312 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 R3HDM4Q96D70 268 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 TMEM30CPA0ZSE6 113 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 OR7C2O60412 319 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 MBP02144 154 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 CRISP2P16562 243 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 ADMP35318 185 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 PRR27Q6MZM9 219 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 PLEKHA3Q9HB20 300 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 MPC1Q9Y5U8 109 aa10.04□□□□□ -0.8
USHBP1-201ENST00000252597 LINC00473A8K010 186 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 F2Z2F3 143 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 SPATA31B1PQ5VZV4 182 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 ERASQ7Z444 233 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 FAM216AQ8WUB2 273 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 LSM10Q969L4 123 aaKnown RBP10.03□□□□□ -0.8
USHBP1-201ENST00000252597 LRFN3Q9BTN0 628 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 NAT8BQ9UHF3 227 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 PILRBQ9UKJ0 227 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 TRAV1-1A0A0B4J248 108 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 RRHO14718 337 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
USHBP1-201ENST00000252597 GNG10P50151 68 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 MEOX1P50221 254 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 ERVK-16P61578 105 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 DOLPP1Q86YN1 238 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 OR8I2Q8N0Y5 310 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 OR10G8Q8NGN5 311 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 OR13A1Q8NGR1 328 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 TMEM170AQ8WVE7 144 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 SPSB4Q96A44 273 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 FAM173AQ9BQD7 235 aa10.03□□□□□ -0.8
USHBP1-201ENST00000252597 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 B4E171 279 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 H0Y8G0 127 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 M0R296 226 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 CER1O95813 267 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 MPV17P39210 176 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 TSPAN7P41732 249 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 LHX2P50458 406 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.8
USHBP1-201ENST00000252597 SMG1Q96Q15 3661 aaKnown RBP10.02□□□□□ -0.8
USHBP1-201ENST00000252597 C19orf67A6NJJ6 358 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 IGHEP01854 428 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 CD82P27701 267 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 DUSP3P51452 185 aaPredicted RBP10.02□□□□□ -0.81
USHBP1-201ENST00000252597 LHFPL4Q7Z7J7 247 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 LINC01551Q86U37 167 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 C1orf210Q8IVY1 113 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 NANOS1Q8WY41 292 aaKnown RBP10.02□□□□□ -0.81
USHBP1-201ENST00000252597 TRIB1Q96RU8 372 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 INTS1Q8N201 2190 aaKnown RBP10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A10PA6NDY2 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A18PA6NE21 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A16PA6NEW6 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A20PA6NIJ5 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A8PA6NJQ4 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A7PA6NKC0 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A22PA8MWA6 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A12PA8MX19 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A5PA8MXJ8 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A23PA8MXZ1 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 SERF1AO75920 110 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 NEURL1O76050 574 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 HPRT1P00492 218 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 CA1P00915 261 aaPredicted RBP10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A15PP0C7V4 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A13PP0C7W8 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A14PP0C7W9 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 FAM90A24PP0C7X0 464 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 GFRA1P56159 465 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 CLDN18P56856 261 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 PSG7Q13046 419 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 OR2Z1Q8NG97 314 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 HSD17B10Q99714 261 aaKnown RBP10.02□□□□□ -0.81
USHBP1-201ENST00000252597 TXN2Q99757 166 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 VAMP8Q9BV40 100 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 HIPK2Q9H2X6 1198 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 PXMP4Q9Y6I8 212 aa10.02□□□□□ -0.81
USHBP1-201ENST00000252597 DNPH1O43598 174 aa10.01□□□□□ -0.81
USHBP1-201ENST00000252597 OR9G9P0C7N8 305 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms