RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 RPUSD1Q9UJJ7 312 aaKnown RBP20.72■□□□□ 0.91
TMEM55B-201ENST00000250489 PUS1Q9Y606 427 aaKnown RBP eCLIP20.72■□□□□ 0.91
TMEM55B-201ENST00000250489 TRAV3A0A0B4J244 114 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 VSTM5A8MXK1 200 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 SHISA9B4DS77 424 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 ARG1P05089 322 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 GNG10P50151 68 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 ACSM6Q6P461 480 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 CYB561D1Q8N8Q1 229 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 ZNF383Q8NA42 475 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 MLXQ9UH92 298 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 LINC00312Q9Y6C7 94 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 HCFC1P51610 2035 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 NBEAQ8NFP9 2946 aa20.71■□□□□ 0.91
TMEM55B-201ENST00000250489 TMEM178BH3BS89 294 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 IGKV1D-33P01593 117 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 IGKV1-33P01594 117 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 CTRB1P17538 263 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 FGF8P55075 233 aaPredicted RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 TFF3Q07654 80 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 HNF4GQ14541 408 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 CTRB2Q6GPI1 263 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 DMRTC2Q8IXT2 367 aaPredicted RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 ADTRPQ96IZ2 230 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 TUBA4BQ9H853 241 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 SLC25A10Q9UBX3 287 aaPredicted RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 DAOP14920 347 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 MDKP21741 143 aaPredicted RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 VDAC2P45880 294 aaPredicted RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 NCMAPQ5T1S8 102 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 C1orf87Q8N0U7 546 aa20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 RPP25LQ8N5L8 163 aaKnown RBP20.7■□□□□ 0.9
TMEM55B-201ENST00000250489 DOCK11Q5JSL3 2073 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 PPIAL4EA0A075B759 164 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 TRGV8A0A0C4DH27 118 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 MAP1LC3B2A6NCE7 125 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 PPIAL4DF5H284 164 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 CRYBA1P05813 215 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 PPIAL4FP0DN26 164 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 BCL2P10415 239 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 CEBPGP53567 150 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 AVPI1Q5T686 147 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 SLC25A48Q6ZT89 311 aaKnown RBP20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 RNASE6Q93091 150 aaKnown RBP20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 MAP1LC3BQ9GZQ8 125 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 CISD1Q9NZ45 108 aaKnown RBP20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 PPIAL4AQ9Y536 164 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 CEP295Q9C0D2 2601 aa20.69■□□□□ 0.9
TMEM55B-201ENST00000250489 E7EQL1 145 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 ZNF429Q86V71 674 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 OR10G4Q8NGN3 311 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 NPCDR1Q9BY65 106 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 ZFP92A6NM28 416 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 H3BQ15 152 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 NHLH1Q02575 133 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 MEF2CQ06413 473 aaPredicted RBP20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 NEUROG1Q92886 237 aa20.68■□□□□ 0.9
TMEM55B-201ENST00000250489 PTPRQQ9UMZ3 2332 aa20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 GFRA3O60609 400 aa20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 FCN3O75636 299 aa20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 RPP30P78346 268 aaKnown RBP20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 ZCCHC14Q8WYQ9 949 aaKnown RBP20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 RHOVQ96L33 236 aa20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 TMEM106BQ9NUM4 274 aa20.67■□□□□ 0.9
TMEM55B-201ENST00000250489 C15orf61A6NNL5 157 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 UCNP55089 124 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 OR10A7Q8NGE5 316 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 CCL17Q92583 94 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 HIST1H2BAQ96A08 127 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 GAL3ST2Q9H3Q3 398 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 HEYLQ9NQ87 328 aaPredicted RBP20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 SLC39A9Q9NUM3 307 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 TCF19Q9Y242 345 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 IFNA10P01566 189 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 MBP02144 154 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 RPL31P62899 125 aaKnown RBP20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 OR4A47Q6IF82 309 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 RAXQ9Y2V3 346 aa20.66■□□□□ 0.9
TMEM55B-201ENST00000250489 TNFRSF13BO14836 293 aaPredicted RBP20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 EIF3GO75821 320 aaKnown RBP eCLIP20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 FOLR2P14207 255 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 FFAR4Q5NUL3 377 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 ISOC2Q96AB3 205 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 DYNLRB1Q9NP97 96 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 WDR83OSQ9Y284 106 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 PLA2G5P39877 138 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 ERVFRD-1P60508 538 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 PMS2P11Q13670 270 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 POU2AF1Q16633 256 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 ZNF709Q8N972 641 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 LHX4Q969G2 390 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 RAB39BQ96DA2 213 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 ZNRD1Q9P1U0 126 aa20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 FOXA2Q9Y261 457 aaPredicted RBP20.65■□□□□ 0.9
TMEM55B-201ENST00000250489 PCNX1Q96RV3 2341 aa20.64■□□□□ 0.9
TMEM55B-201ENST00000250489 OR10G9Q8NGN4 311 aa20.64■□□□□ 0.89
TMEM55B-201ENST00000250489 OR10G7Q8NGN6 311 aa20.64■□□□□ 0.89
TMEM55B-201ENST00000250489 CTXND1A0A1B0GTU2 59 aa20.63■□□□□ 0.89
TMEM55B-201ENST00000250489 A0A1W2PPE2 198 aa20.63■□□□□ 0.89
TMEM55B-201ENST00000250489 A0A1W2PPH5 198 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms